Microarray Probes on PGSC0003DMT400012413
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33901_PI426222305 |
JHI_St_60k_v1 |
AACATCCTCTTAGACTCGGATTACAGGGCCAAACTATCTGATTTCGGGCTAGCAAAGGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012413
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012413 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G05940.1 |
+2 |
3e-176 |
510 |
270/462 (58%) |
Protein kinase superfamily protein | chr2:2287514-2289270 REVERSE LENGTH=462 |
Transcript Sequence (1714 bp)
>PGSC0003DMT400012413 1714 pgsc_dm_v3.4
GAACAAATTAAACCGTCACTTTAGACTTGTTACAAACTCTTTTTCCCTGTTTGGTTTCAT
TAACACATTTTGTCAAACACCTTGTGAGCAGTAAAAATTGACACCAAACTGATCAAATTT
CATCAGATTTAGTAGAACAGCTATGGTTACTTGTGGAATTGACTGGAAATCTGTTCTGCC
TAATTGTTTTAAGGGCAATAATGTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACA
GATGAATTCTGATCATCATAGGTTAGCTTTTTCAGATATAAGTACTGATTCTAGATCAGT
ACTTATATCGTTGGATGATCTCTCATCGAACGCGGTTATTGGTTCAAATCTTCATGTATT
CACATATGAGGAGCTTAAACTCATCACTAGTGATTTCTCCCCTGCTAATTTTCTCGGTAA
AGGTGGATTTGGACCCGTTCACAAGGGGTTCATTGATGATAAGATTAAGCCTGGTTTGGA
TGCTCAACCTGTTGCTGTTAAATTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATG
GCTGACTGAAGTGGTCTTTTTGGGGCAATTGAGGCATCACCATCTAGTGAAGTTGATTGG
ATATTGTTGGGAGGAGGAGCAGAGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCT
TGAGGATCAACTATTTTCGAGATATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAAT
TATGGTTGGTGCTGCAAAGGGACTGGCTTTTCTTCACGGAGAAGAAAAGCCAGTAATCTA
CCGTGATTTTAAGGCTTCTAACATCCTCTTAGACTCGGATTACAGGGCCAAACTATCTGA
TTTCGGGCTAGCAAAGGATGGACCAGAAGGCGATGACACACATGTCTCGACTCGTGTGAT
GGGCACTCATGGCTACGCTGCTCCAGAGTACATCATGACTGGTCATTTGACAAGCAAGAG
CGATGTGTACAGCTTCGGAGTAGTTTTGTTAGAACTAATAACAGGACGACAAGCCATGGA
CAAGAAACGCCCCCTCAAAGAGCGAATCCTGGTGGATTGGGCAAGACCAATGTTAAGGGA
TCCACACAAACTTGACAGAATAATGGACCCACGACTTGAAGGTCAGTACTCGACACAAGG
AGCAAAGAAGGTTGCTGCATTGGCTTATCAATGCTTAAGCCACCAGCCAAGGTCTAGGCC
CACTATGAGCAACATAGTGAAGATCTTGGAGCCAGTCTTGGACATGAAGGATATACCAAT
GGGCCCATTTGTTTACGTCGTCCCCTCCTCAAAACCTGACAAGGGAACGGAAATTGGTGA
ATTGAAGAGTAAAGTGGACGATGAAAACAAGGCGAATGTAAGGGAAAAAGAAGTAGGAAA
TGCAGGGGAAAACAGAGAGGATGGTAATGCTAAGCAACGGAGAGCCGGACACAGGCATAA
ACACAGGCTAAAGACTGATGCTTCTGTTTACTCAGATACTCATTTGTATCAAAAGACTGT
AAGGCACGAAAGAACAAACAAATTAAATTCTTGTTGATTAATCGCAATGAAGAGAAGAAA
GGGAAAATAGATTAAAAATGTAAAACATATGTGAATAGATTGTATAATGAAGTACTCCAA
ATGTATTTTTTTGTTAAATTAGTTTACATTTTAGTCTCAGTTTTGGACAAGATCCTTTTA
GTGTTTTCGTTTTGGTTGTTGAAAGCAATGTACA
