Microarray Probes on PGSC0003DMT400011188
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51361_PI426222305 |
JHI_St_60k_v1 |
GCACATGATCTTTAGTGCTTGTTTGGTTAATGTTGTACCAAGTCAAATTAAAAGTCCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011188
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011188 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G49340.1 |
+2 |
4e-113 |
338 |
164/339 (48%) |
Cysteine proteinases superfamily protein | chr3:18293347-18294577 REVERSE LENGTH=341 |
Transcript Sequence (1181 bp)
>PGSC0003DMT400011188 1181 pgsc_dm_v3.4
AAAAAAATCAATTATTTTACCTAGGTATTTTCTTGTAATTATGGCTTTGGTTCTTGCATG
GAAAACACAATTCACCCTTCTCTTTGTGATTTTTGGGATGTATGCATCTCAAGTCACTTG
TAGAAACCTTCAAGATCCATCCTCCATGTTGGAAAAACACGAGTCATGGATGGCGCGACA
TGGAAGAGCTTACGAAAATGATATAGAAAAGGCGAAAAGATTGAATATTTTCAAGAAGAA
CGTCAAATTTATTGAGTCATTCAACAATAATGGTAGTAGGTCATATAAATTAGGCATCAA
TAAATTTTCTGATCTTACTTCTGAGGAATTCTTGAGGTATTATACTACTAATCATGGACT
TAATAATAAGTTTTCTTCTATAAAATCTCAAAAATTATCTCCAACAACAATTTCATCATT
CAAGTATGAAAATACGAGTGATGTTCCATCTGAAATGGATTGGAGAAAGAGTGGTGTTGT
CACTAGCATCAAAGATCAAGGAAGATGTGGATGTTGTTGGGCATTTTCCGCGATCGCGGC
CTTAGAAGGAGCAAATAAACTCTCAAAGGGAAAATTAATTTCACTCTCCGAGCAACAACT
ACTAGATTGTTCAACCGAAAACTACGGTTGTAACGGCGGATTAATAACCACGGCCTACGA
TTACATCGTAAAAAATAATGGTATCGCCGCTGAATCCGACTACCCTTACGAAGAAAATCA
AGATTCATGCAAAATACAAGACTCGATAGTAAAAATGAGTAACTACGAAACGTTACCTCC
ATCAAGTGAACCAACGTTACTTACCGCGGTGGCGCGACAACCCGTATCGGTGGGTATCGC
GGTGAATGAAGAGTTTATGTCATACCAAAGAGGAGTTTATGATGGAAATTGTGGTGATGA
AGTAAATCATGCAGTTACAATAATTGGTTATGGTACAAATAATGAAAATGGTGCAAAATA
TTGGATAATTAAGAATTCATGGGGGTCTAGTTGGGGTGAAAATGGTTATATGAAAATTGC
TAGAGATATTGGAAATAATGACGGTCTTTGTAGGATAGCTACTATGGCTTCATATCCTAT
TGTTTAGAAAATTTGGTTTAAATTAATAGCACATGATCTTTAGTGCTTGTTTGGTTAATG
TTGTACCAAGTCAAATTAAAAGTCCTTGTATTACATAATTG
