Microarray Probes on PGSC0003DMT400011069
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50027_PI426222305 |
JHI_St_60k_v1 |
TTCTTCATGTCCAAGTAGTCTACTACAACATCAACAACCTACTAACCCACATCTTTAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011069
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011069 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G13180.1 |
+2 |
5e-71 |
223 |
116/228 (51%) |
NAC domain containing protein 83 | chr5:4196643-4197577 FORWARD LENGTH=252 |
Transcript Sequence (915 bp)
>PGSC0003DMT400011069 915 pgsc_dm_v3.4
GAAAGTCTCTCGATTCGTTCTCTCATAAATAAATAAAGCTTGTGTTGATAGAGTCGAATA
ATTTAATTAATTGATGGACAAGTTCAATTTTGTGAAAGATGGAGCGATAAAGCTACCTCC
TGGTTTTCGATTTCAACCTACTGATGAAGAAATTGTGTTTCAATACTTGATACGTAAAAC
ATTTTCTTGTCCCTTGCCTGCTTCTATTATCCCTGAAATCAATATTTGCAGTAACGACCC
CTGGGATTTGCCTGGTGACATAGAGCAAGATAGATATTTTTTCAGCAACAAGGAAGCTAA
ATATAGGAATGGTAATAGAGCAAACAGGGCAACTATAGGTGGCTATTGGAAGCCAACTGG
TTTAGATAAACAAATTATATGCAGTAAAAGAAAGCCAATTATTGGGATGAAGAAAACTCT
TGTTTTCTATAAAGGAAAGACTGCTTCTCAAGCTTATAGAACTGATTGGATTATGCATGA
ATATCGTCTTGTTCTTCCCAAAAATTCATCATCCAATTTACATGCCCATTTCAAGAAATC
TTCTCAGAATTCATTGGTTCAAATAGGAAATTGGGTTCTTTGTCATATATTTTTGAAGAA
GAGAAATGGAAAATGTGATGAAGAAATTGTTGAGGCTAATTATCATGATGATAATTACAA
GACTAATTATGATGAACATAATATAGTCCAACCAATAGTGTATTATGATTTTATGAGGGA
AGATAATTTGAGTGATAGTAGAGGTGCAGCTTCCTCTTGTTCTTCTTCTTTGAGCATTAA
TGATGATGCAAATGAGGTTTCTTCATGTCCAAGTAGTCTACTACAACATCAACAACCTAC
TAACCCACATCTTTAATTCATAATATTGTACGTTTCTTGTTTTCCCATTGTTTAATGCAA
TAATATTTTCTTCTA
