Microarray Probes on PGSC0003DMT400010677
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11495_PI426222305 |
JHI_St_60k_v1 |
CACGATTCAAATTTGGGGTTGTAGAGATCATGGAATATACTTATTGTCCCGAAATGTATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010677
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010677 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G29990.1 |
+1 |
2e-154 |
451 |
220/279 (79%) |
alternative NAD(P)H dehydrogenase 2 | chr2:12793562-12795913 REVERSE LENGTH=508 |
Transcript Sequence (1291 bp)
>PGSC0003DMT400010677 1291 pgsc_dm_v3.4
GTAAGTTTGTGACTTTACTGTTATATTGGATGAAGTTAAGTCATGATCCGGACAATGTTG
ATTTCTTCTCACTTTTGGTCATGGATTGAGGCAGGAGTTAGTGAGGAAGAAAAGCGTAGA
CTCTTACACTGTGTTGTAGTTGGAGGTGGTCCGACAGGAGTTGAGTTCAGCGGCGAACTT
AGTGATTTTATCCTGAAGGATGTTCATCAAAGATATGCTCATGTCAAAGACTACATTCAC
GTCACGTTGATTGAGGCAAATGAGATATTATCCTCCTTTGATGATCGTTTACGTGTATAT
GCAACCAACCAGTTGACTAAGTCAGGAGTTCGTCTTGTACGAGGCCTTGTCCAACATGTC
CAACCGGATAAGATAATACTTAGCGATGGCACAAACGTTCCCTATGGTCTGTTAGTGTGG
TCTACTGGTGTTGGCCCTTCACCTTTTGTCAACTCACTTGATATACCAAAAGCTAAAGGA
AGGATTGGAATTGATGAATGGTTACGCGTCCCATCGGTACAAGATGTATACTCAATTGGT
GATTGCAGTGGTTTTCTTGAAAGTACAGGCAGGCAAGTTCTTCCAGCTCTGGCCCAAGTT
GCAGAGAGGCAGGGAAAATATTTGGCAAGTTTGTTGAACAAGGTGGGTAAAGAAGGTGGA
GGGCATGCCAATTGTGCACAAAACATAAACTTGGGAGATCCATTTGTCTACAAACATTTG
GGAAGCATGGCTACTATTGGAAGATACAAGGCCCTTGTGGACCTTAGAGAGAGCAAGGAA
GCAAAAGGTGTATCTCTAGCAGGATTCACAAGTTTTTTTGTTTGGCGTTCAGCATATTTG
ACTCGTGTAGTGAGCTGGAGGAACAAAATTTATGTTCTAATTAATTGGTTGACAACCTTA
GTATTTGGTCGTGATATAAGTAGGATATAGACCAACAAAAGAAGATGATTCCTTTTAGTT
TCATTCAAAAGGAACTATCCTTACGTGTTGCGGCGGACTTTGTGCAAGCAGTGTCAGTCA
ATTATCACGATTCAAATTTGGGGTTGTAGAGATCATGGAATATACTTATTGTCCCGAAAT
GTATTTTATATTCGCATTATCTTTATATGATGTTGACGTATTTGTATATATACACACATT
AATTTTTTTACCTTTTACTAAAGAATATTGTGTGTGCATTGCAATTAGTGGCATACGCCT
ATTTTTTGGAGGGGTTATTGCCTCTATAGTTCTAGTTTCAAATTAAGTTTTGATGATTTT
TGGTTTGGGGTTAAGAGGTGTAGCATCATTT
