Microarray Probes on PGSC0003DMT400010674
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11406_PI426222305 |
JHI_St_60k_v1 |
TGAGCTAAATTCATTCCCCCCTATGGATTAGTCTACATTCTCTACAAATTTTATCAACGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010674
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010674 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G29990.1 |
+3 |
0.0 |
638 |
326/454 (72%) |
alternative NAD(P)H dehydrogenase 2 | chr2:12793562-12795913 REVERSE LENGTH=508 |
Transcript Sequence (2422 bp)
>PGSC0003DMT400010674 2422 pgsc_dm_v3.4
AAGTGTAGGGGGTATATGTGTTACTATTACTTAGCTAAAAATTTGTTTGTCACTTGAAAA
TAAATATTTTGCCAACAAAAAGTAGAATTCTTTTTTTTAGTGACACAATGCCATGGTTCA
AGAATCTCATCAAAATCTCCAAAACAATTACAAACCAATCATCATCTTACAAATCTATAA
CTCCATTAGCCTCACCTTTACTTGCTCAATTTCTACAATTCACTAAACAATACTCTACTA
ATGATCATGTTGTTGGTTTGGAAGCAACAAAAAGTGACCAAAAGCCAAGAATTGTTGTGT
TAGGTTCTGGATGGGCAGGATGTAGGCTAATGAAAGACATTGACACAAATATTTATGATG
TTGTGTGTGTGTCACCTAGGAATCATATGGTGTTCACTCCATTATTAGCATCTACTTGTG
TTGGTACTCTTGAGTTTAGGTCTGTTGCTGAACCTATTGGAAGGATTCAACCTGCTGTTT
CAACACAACCAGCTTCTTATTTCTTTCTTGCTAATTGCAATGCCATTGATTTTGATAATC
ATATGATACAATGCCAAACTGTGACAGAGGGAGTTGAAACCTTGGAGCCATGGAAGTTTA
ATGTTTCATATGACAAGTTAGTGATTGCATCTGGAGCACATGCTTTGACATTTGGAATTA
AGGGTGTAAACGAGCACGCCACATTTCTTCGTGAAGTTCATCATGCTCAGGAAATACGGA
GGAAACTACTTCTAAATCTCATGTTGTCTGATGTGCCTGGAGTTAGTGAGGAAGAAAAGC
GTAGACTCTTACACTGTGTTGTAGTTGGAGGTGGTCCGACAGGAGTTGAGTTCAGCGGCG
AACTTAGTGATTTTATCCTGAAGGATGTTCATCAAAGATATGCTCATGTCAAAGACTACA
TTCACGTCACGTTGATTGAGGCAAATGAGATATTATCCTCCTTTGATGATCGTTTACGTG
TATATGCAACCAACCAGTTGACTAAGTCAGGAGTTCGTCTTGTACGAGGCCTTGTCCAAC
ATGTCCAACCGGATAAGATAATACTTAGCGATGGCACAAACGTTCCCTATGGTCTGTTAG
TGTGGTCTACTGGTGTTGGCCCTTCACCTTTTGTCAACTCACTTGATATACCAAAAGCTA
AAGGAAGGATTGGAATTGATGAATGGTTACGCGTCCCATCGGTACAAGATGTATACTCAA
TTGGTGATTGCAGTGGTTTTCTTGAAAGTACAGGCAGGCAAGTTCTTCCAGCTCTGGCCC
AAGTTGCAGAGAGGCAGGGAAAATATTTGGCAAGTTTGTTGAACAAGGTGGGTAAAGAAG
GTGGAGGGCATGCCAATTGTGCACAAAACATAAACTTGGGAGATCCATTTGTCTACAAAC
ATTTGGGAAGCATGGCTACTATTGGAAGATACAAGGCCCTTGTGGACCTTAGAGAGAGCA
AGGTTTCCTCTTTCTTTTTTACATCTATATTCCTTTTTTTTTTATTACGGTGGTGTCTGG
ATAGAGCTTTGACGTACTTTAATCATACCCCGAGTTACTTGCTATTGATATCTCCCACCA
GCATAAATATAGAGTAATTATATCGACCAAGAGCTTAGACACATGAGAATGCATCACTTT
ACTATTTTTGTCTCTGCTATATTTTGAACCCTAACTTTCCATGATTTTCAAGCGCATTTG
CACAAATGACCTTTTTTCTCCGAGGTCACTATTTAAATTTCAATCTCCATGAGCCTAGTG
AGCTAAATTCATTCCCCCCTATGGATTAGTCTACATTCTCTACAAATTTTATCAACGGAA
GCTCTTATTTTCATATTTTTCATTTTGTACCTTAATTCTGAATCTATTTAACGTTTTTCT
TTTAACTATGTTCATTAATTATCCGATAAAATTAACTTGTGTTTGCAGGAAGCAAAAGGT
GTATCTCTAGCAGGATTCACAAGTTTTTTTGTTTGGCGTTCAGCATATTTGACTCGTGTA
GTGAGCTGGAGGAACAAAATTTATGTTCTAATTAATTGGTTGACAACCTTAGTATTTGGT
CGTGATATAAGTAGGATATAGACCAACAAAAGAAGATGATTCCTTTTAGTTTCATTCAAA
AGGAACTATCCTTACGTGTTGCGGCGGACTTTGTGCAAGCAGTGTCAGTCAATTATCACG
ATTCAAATTTGGGGTTGTAGAGATCATGGAATATACTTATTGTCCCGAAATGTATTTTAT
ATTCGCATTATCTTTATATGATGTTGACGTATTTGTATATATACACACATTAATTTTTTT
ACCTTTTACTAAAGAATATTGTGTGTGCATTGCAATTAGTGGCATACGCCTATTTTTTGG
AGGGGTTATTGCCTCTATAGTTCTAGTTTCAAATTAAGTTTTGATGATTTTTGGTTTGGG
GTTAAGAGGTGTAGCATCATTT
