Microarray Probes on PGSC0003DMT400010633
Probe ID | Chip | Probe Sequence |
---|
CUST_11409_PI426222305 |
JHI_St_60k_v1 |
CACTATCAAGGTCACTATCGAACTTCAATTCATTAATCGAGTTTTGAAAAAGTGGTCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010633
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010633 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G07300.1 |
+2 |
2e-09 |
56 |
27/73 (37%) |
josephin protein-related | chr1:2245914-2246300 REVERSE LENGTH=128 |
Transcript Sequence (1343 bp)
>PGSC0003DMT400010633 1343 pgsc_dm_v3.4
ATTTCTAGCAAGTCTTCCAATTATCACCTCCCCCTCTTTAAAAATACTATATGATTGGTG
TTCGAGTTAATTTGCGTAAAATCATTTTTTATTTTTACTATTTGTTCTCCATATAAGCAC
ACACACCATCTTCACCTTCTTTCCTCATTCCAATTTCTAGTAATAAACTTTCAAGGTAGC
ACTTCCCTCATCACCACATATACTAAATTAGTATATTTTAAAGAAATTATATAACGATAA
GTGGTTAAGTCAGTATGCGTTAAATTATCCTTGATTTCTACCCTTTCTTTTCTATATAAG
CACAAAATATGTACCTTCTCTTTCTTCATTCCAATATCTAATAGTCTTCCAATTATCACT
TCCCCTTACCATCTATACTACGTTTTTATTTTTTACATTAACTAACGATAGCGTTGAAGG
TGGTTTCCGTTAAATTATCTTTGATTTCTATTTCCAGTACCCTTTGTTCTCTATATAAGC
ACAAATCATGTTCACCCTCTCGCTTCATTCCATTTTCTAGTAATCTTCCAAGGAATCACT
TTTCTCACTACCTATACTAAAGTTAGTATATTTAAAATATATATATAACTGTAGTGTTCA
AGTCAATTTGCATTAAATCATCTTTGATTTCGAGATGCCGGTAAGAGGCTGTGAAGGAGG
GAGTGTGGTGAAGCAAGAGATGACCAAGAATACAAAGATAGCAAGCAAGTTTCAAAAGCA
AAACTCTACAAAGAGTGTTGTTGATGGTACTACAAATGATGCAAGAAGTACCACCACCAC
AACAAGTTGTAGCTTCAAGATGCCTAATAGATCCCAATTATCCCCTATTAAGATTTTCAA
ACATCTTGGAGGAAAAATGGCTGCACTTATAAAGATGGTATCTTCTTCAAAGAGAAGTTG
TAGGAAAGTTACTAATTCTCCAGAGAGAACAACAATTTCTGCTAAGCCAACCGCTGCCCT
AAATATTGACTCACATAGGGCAGAGGCCATTGATGATTGTATTCAATTCATCAACTTGTC
TTCTTCTTTGCCTAGATCTAATTCAGTGTCATAAGAGATCGGAGAATCTCTTGATAAGGA
GCGTTTTATCGTGTTATTTATATTAATTGACCATTTTTTGTGGTTTTGTATCTATAAGTT
GGTTATATTTTTAAAATTAGACGTGTGATTTGAATACAATAATTAATTTTGAATGACTTT
CTAGTCAATAGCCACTATCAAGGTCACTATCGAACTTCAATTCATTAATCGAGTTTTGAA
AAAGTGGTCAACTTTCAAATAGAACATCAAGAAGTGACTATTTGTGTAAATTAGCCCTAA
ATACCCTTTTAATCGAATTTTAC