Microarray Probes on PGSC0003DMT400010463
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12170_PI426222305 |
JHI_St_60k_v1 |
GTGGTGTTTTTCACAAGAAATCTAAGTCAATGAAAGTCTACCTTCATGTCCTTTTCTAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010463
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010463 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57150.4 |
+2 |
6e-55 |
184 |
121/226 (54%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:23152361-23154801 FORWARD LENGTH=264 |
Transcript Sequence (1105 bp)
>PGSC0003DMT400010463 1105 pgsc_dm_v3.4
CTTGCCCTTCTTCTCAAATTTTAAAGCTCACACCCACTTTAACCACAAAAAAGATATTTA
AAGCATAAATTGTCTTGTTGTGCTTAATCTTCACTCCACCTCGATGGATAACATTGGTGA
TGAATATAAAAATTATTGGGAAACAACCATGTTCTTACAATCTGAAGAACTCGATAGCTA
TTTCGATGAACCAATTTCATCGTATTATGATTCAAGTTCGCCGGATGGGTCACAGTCATC
GATGGCATCGAAGAACATTGTATCAGAAAGGAATAGGAGGAAGAAGTTGAATGAGAGGTT
ATTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCTTCAATAATCAA
AGATGCAATTGATTATATTGAAGAATTGCATAAGCAAGAGAGAAGAATTCGAGGAGAAAT
TTCAGAGCTTGAATCTGGAAGATCGTCAAAGAAGAATAGTACCGATCTTGAATTTGAACA
AGATGAAAGTTTTGATTCAAAGCCTAAAAGATCGAGAAGATTTGAGATGCAGTATGGATA
TGATTCTTCAGGATCAACTACAAGATCACCACCATCTTCTTCCCCTGTTGATGTTCTTGA
GTTGAGGGTATCTTCAATGGGAGAAAAGACAGTGGTGGTGAGCCTTACTTGCAGCAAAAG
AACAGACACAATGGTAAAAGTTTGTGAGGTGTTTGAATCTTTGAATATCAAAATAATTAG
TGCAAATATCACTGCTTTCTCTGGGAGGCTTCTCAAGACAGCTTTCATTGAGGCTGATGA
AGAAGAGAGGGATCTTTTGAAGTTGAGGATTGAAACAGCTATAGCTTCTCTAAATGATCC
AGATAGCCCAATGAGTTCTTAGAACAACAATGGCTTGGATTTTAACTATGTTTCGCCTTC
ATGTAATGATGATGTAGTTATTTGAAGAGTGTTTTGTTCCACGTTATTTCTACCTCCTTC
TTCTTCTTAAAGTTTGGTCATCTTTGACCGGCTATTTATGTAGTTTGTAGGTGGTGTTTT
TCACAAGAAATCTAAGTCAATGAAAGTCTACCTTCATGTCCTTTTCTAACATCTTGTCTA
AATTTACATAAGTTTTCAAACACAC
