Microarray Probes on PGSC0003DMT400010462
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12208_PI426222305 |
JHI_St_60k_v1 |
CAAATATCACTGCTTTCTCTGGGAGGCTTCTCAAGACAGCTTTCATTGAGGTAAACACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010462
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010462 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G29930.3 |
+2 |
5e-31 |
119 |
75/155 (48%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:14644108-14645505 FORWARD LENGTH=263 |
Transcript Sequence (919 bp)
>PGSC0003DMT400010462 919 pgsc_dm_v3.4
CTTGCCCTTCTTCTCAAATTTTAAAGCTCACACCCACTTTAACCACAAAAAAGATATTTA
AAGCATAAATTGTCTTGTTGTGCTTAATCTTCACTCCACCTCGATGGATAACATTGGTGA
TGAATATAAAAATTATTGGGAAACAACCATGTTCTTACAATCTGAAGAACTCGATAGCTA
TTTCGATGAACCAATTTCATCGTATTATGATTCAAGTTCGCCGGATGGGTCACAGTCATC
GATGGCATCGAAGAACATTGTATCAGAAAGGAATAGGAGGAAGAAGTTGAATGAGAGGTT
ATTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCTTCAATAATCAA
AGATGCAATTGATTATATTGAAGAATTGCATAAGCAAGAGAGAAGAATTCGAGGAGAAAT
TTCAGAGCTTGAATCTGGAAGATCGTCAAAGAAGAATAGTACCGATCTTGAATTTGAACA
AGATGAAAGTTTTGATTCAAAGCCTAAAAGATCGAGAAGATTTGAGATGCAGTATGGATA
TGATTCTTCAGGATCAACTACAAGATCACCACCATCTTCTTCCCCTGTTGATGTTCTTGA
GGTAATTAATTGATTAATAATGTCTCTCACATGTTTTTCTTTTTAGTCCGTTCTAAAAAA
ATAAAAAAAATAGATTTAAAATTGGGGTTGCAGTTGAGGGTATCTTCAATGGGAGAAAAG
ACAGTGGTGGTGAGCCTTACTTGCAGCAAAAGAACAGACACAATGGTAAAAGTTTGTGAG
GTGTTTGAATCTTTGAATATCAAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGG
CTTCTCAAGACAGCTTTCATTGAGGTAAACACAATCTTTTTCTTTTCTTTTCTCTGTTTT
TTGTTCCCTTGCTTTTTCC
