Microarray Probes on PGSC0003DMT400009583
Probe ID | Chip | Probe Sequence |
---|
CUST_7664_PI426222305 |
JHI_St_60k_v1 |
GAAACCAATAGCAGATCAGGTTATGCCAATGAACATAGGTATCACAAATCAAAACTAATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009583
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009583 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G75250.1 |
+1 |
9e-31 |
115 |
57/99 (58%) |
RAD-like 6 | chr1:28245073-28245453 REVERSE LENGTH=126 |
Transcript Sequence (1018 bp)
>PGSC0003DMT400009583 1018 pgsc_dm_v3.4
AAGACATCTTGATTCTGCATATCTCAATTTCCTCTTCGAAATTTGCCTTTTACAAGATAT
GCAAGAGAATTCCATTCTGATCAAAAGTATACAGCATATTATATTACTGTTATAAACACT
CTCATTCGAAAGACAAAAATGTTCTAATTCTCAGCAAGATCACACGCGATCGCCCACATT
TGACTCAAGAATAAACAACAAACATATCCAGAATAGAAAAGTGACCACTGATCTTGCAAT
TTAGCTAAGATAAGGTTCATTGGAAACTTTGGTAACTTCGTGTTTCTGCAAAGTTTTTGG
TAAACAGTGCTACTGTTTTAAACACAGATCGACAACAAGCCATAAAATTGGAATTAGGGG
ATCTAATCTCTTCCAGCAGGGTGAATTTCCTATCTGATATATCCACTTGCTGATGATAAT
ACTTTTCAACAAAAAGTCTGGTCACAAAAATACTATTTTCTTATTCTCCCTCCACCTATT
CCCATTAGCATTACTTGAAGAATCATGTATTGTACCTCTCCTAAAAGAAAAATATTCGCC
AACTTGCTACAACTCAACGCCTTCTTCTCCAACTTATAAGGAGCTAACTTAGCATTATGT
TCCCCATACAATTCACTTGAGCTAGCACTCGGCTTTAGGTGAAGTAGCTCTGCACTTCTC
CCCAGAGCTACTTCTCGTTTAACTTGTAATTCTTCAATGGCCTCGTGGACTTCAAGGCAA
AACAAGAAGTTCGAAGAGGCTTTGGCTTTATATGACAGAGACACACCTGATCGTTGGCAT
AACATTGCAAGGTGTGTAGGTGGAAAATCAGCAGCAGAAGTGAAGAGGCATTATGGAGTG
CTTGTGAAGGATATCATGCAAATAGAAAATGGTCAAGTACCTTTACCAAATTACAAAGCC
GCGGCTGAAACCAATAGCAGATCAGGTTATGCCAATGAACATAGGTATCACAAATCAAAA
CTAATCTTTATTAATTAATCCATATACAAGTCAATGATACGTTTTGTATCGATTCCCA