Microarray Probes on PGSC0003DMT400009551
Probe ID | Chip | Probe Sequence |
---|
CUST_7471_PI426222305 |
JHI_St_60k_v1 |
CTTGGCTACACAACAACAAAATTGGAAATTGCTCGTTGAATATTCAAATGATGGGTAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009551
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009551 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G28305.1 |
+2 |
1e-99 |
300 |
167/211 (79%) |
Putative lysine decarboxylase family protein | chr2:12081186-12084307 FORWARD LENGTH=213 |
Transcript Sequence (1347 bp)
>PGSC0003DMT400009551 1347 pgsc_dm_v3.4
GTAAAAATGATGAAAAAGTATAGGCGGAAAGTGTATATAAAAAAGGACCAATAATAGCAT
TTTCTTCTCACATCAACATTCCCCTCTTTGCCTCCTCTGCTTAATTCTTCAATTTCAAAG
ATAATTGCTGACTCAAACTCTCTTTTTTCTCAAAAATTCCTTCTGTTCCCCTCTCCCTTT
TTCAATCAAACTCATCGCATCGAATTTGCTTACTACGATTTACGTCACGTAAATAATGGA
AAACAATCACCAGACACAAATTCAGGCCACTAAAACATCAAGATTCAAACGCATATGTGT
TTTTTGTGGAAGCAGTCCAGGCAAAAAGCCAAGTTATCAACTTGCTGCTATTCAACTTGG
CAATCAACTGGTTGAAAGGAACATCGACTTGGTTTATGGAGGTGGCAGTGTTGGCTTGAT
GGGCCTAGTTTCTCAATCAGTTTTTAATGGTGGCCGCCACGTGTTAGGTGTGATTCCTAA
AACTCTTATGCCAAGAGAGATTACTGGAGAAAGTGTTGGAGAAGTAAGAGCAGTGTCTGG
AATGCATCAAAGAAAAGCAGAAATGGCAAGACAAGCTGATGCATTCATAGCCTTACCAGG
TGGCTATGGGACATTGGAAGAACTCCTAGAAGTCATCACTTGGGCTCAACTAGGCATTCA
TGATAAACCAGTAGGTTTACTTAATGTAGATGGGTACTATAATTCATTATTGTCATTTAT
AGACAAAGCTGTTGATGAAGGCTTTGTTACACCCTCTGCCCGTCACATCATTATTTCTGC
CCCAACTGCCCAAGAACTCATGTCTAAGCTTGAGGATTATGTCCCAAAGCATAATGGGGT
GGCACCAAAATTGAGTTGGGAAATGGAGCAACAACTTGGCTACACAACAACAAAATTGGA
AATTGCTCGTTGAATATTCAAATGATGGGTAGATTTAATATATATTTATAGAGAAAAATG
TAGTAAATTTCTTTGAAGACTTAAATTCATCGATTATGACTTAATTACCATAAGGTAAGA
TGTTGATGGGAAAAAGCTTCAGAGAATTAATTAATATAATTAGTAGCTTTACAGCAATTT
TAACTTGCTGTTTATAATTAGTTGCAAGGGGAAAAAAAATTACGTACTAATTTGTTTAGT
GTTGATTCATTTTTGTCCATTAGGCTAATCAAATGCCTAATTAAAACAGGAAAAAGTTGA
TGTAGTACAAGTAATTGTTTTTTTTTCTGTCTGTATATGATTGTTTGGTAATGTACATTA
ATTTCTTTGTTATTCTATAGTTAATTGTGTTTACTCTAATGTAAAACGTGTAAGCTTATC
TTATGAAATGAAATATAAATATATTTT