Microarray Probes on PGSC0003DMT400009515
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7734_PI426222305 |
JHI_St_60k_v1 |
TCTTGTAGATTGGTGATAATGATGTGTTTCCGATTTGGGATACTGAGATTGAGAGCACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009515
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009515 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G75540.1 |
+1 |
2e-49 |
176 |
115/236 (49%) |
salt tolerance homolog2 | chr1:28366059-28367398 FORWARD LENGTH=331 |
Transcript Sequence (1909 bp)
>PGSC0003DMT400009515 1909 pgsc_dm_v3.4
TTTCAACGCACCCCAGTCTTTCCCTTCTTATAAGCTCTCCATTTCTGCACTTTTCTCTAT
CATCTTCTTCTTCAATTATTTTTTCTTCTTTTTATATATAATTTAATTAATCTAATGAAG
ATCCAGTGTGATGTGTGTAACAATAATGAAGCCTCTGTTTTTTGTGTTGCTGATGAAGCT
GCTCTTTGTGATTCTTGTGATCATCGTGTTCATCATGCTAATAAACTTGCTAGCAAACAT
CAACGTTTCTCTCTTATTCAACCTTCACCTAAACAAATACCAGTTTGCGATATCTGTCAG
GTAAAGTAGTCAGAGACGGATTCAGAATTTAAATTTAGAACTCTGAGTCATGAGTTTATT
AATTTTTTTGGGTACTTAATTTTACAGGAAAGAAGGGCTTTTTTGTTTTGTCAACAAGAC
AGAGCAATTCTATGCAGAGAGTGTGATGTTTCAATACACAAAGCTAATGAACATACACAG
AAACATAATAGATTTCTATTAACTGGTGTCAAAATTTCAGCGAATTCTTCGCTTTATACT
TCATCAGAATCAGCATCAGCAACTTCATGTAGTGCGAATCAAGATTCTGTTACAAATCTC
AATAAGTCTCAAACTTGCACAAAAAAGACTTTGCCTGTTTCTGGTTCTGTTCCTCAACAA
GTGTCAGTGGCAGTTAATATTGGGGAAAATAGTTATACAAGTAGTATATCAGAGTACTTA
GAGATGTTACCTGGATGGCATGTTGAAGAATTGCTGAATTCCTCTACAATTCCTACTAAT
GGTTTCTGTAAGGTTTGCATTTTGTGCTCATTTTCAATCTTATAACTGGTAAAATTATTG
TTATGTGATCAACAGATTATTGATTCGAGCTGTGAAAATAGTCTTTTGTAGAAATACAGA
GTAAGGCTATTGTACAATAGACCCTTGAGGTCCGATCCTTTTCCACATAGCTGAAGCTTA
GTGCATTAGACTGTCATTTTTGTCAAATGGTTGTGAAATGCAATTATCTGATCTATTTTT
TTTCTTGTAGATTGGTGATAATGATGTGTTTCCGATTTGGGATACTGAGATTGAGAGCAC
AATGAATTCATTCTCACCAGAAAATTTAGGTATTTGGGTCCCTCAAGCACCTCCACCTCC
TACTCCTCAAAAGAATCAGAACCAAGTTTTCCCTCAGAATATAAACTTTGGTGGACAAAT
TGAATTCAAGAATATGAAGGAAGTTACAAGTAACAAGTCAAGTAGAAAGTGGAGAGATGA
CAATTCTTTTGCTGTTCCACAAATCATCCCATCATCATCTTCTATTTCCTTCAAAAGATC
AAGAACTCTTTGGTAGTTGGATCCAATCATCTTTTTTTCTTTTAATTCCCTAGTTTGATT
TTTTTTTCTATTTCTGTGGGTATTTCTTTATTTTTTTTTGCCTTTTCTTGATTTAGTTTG
AGCAACAAAAAAAAAATGAAAAAAAAGAACACCCCATCTCCTCTTTTGTGCTCAATTAAT
ACACAACTTGGTTTTGTTGTGTTCTTGGAATTATTGTTTTGGTGCAAGGGCCTCTTTTGC
TTTGTAAATATCTTTTTAGGCATAATACATAAACACACTCTCAAATTTAGCTTAAATTGT
CAAGCAAATATTTCAATTTACAAAATGGCCTTCTAGGACTTTCAAAATTGATGTGTTACG
TCAGTGTTGGATGTCCACAAGATACAATAAGCAAGGATGAATATTGGAATGCTTAGTTGC
TAGTCGAGACCAAATTGAGGTGTTGAGATATGTATTCTCAAAGTTAGAAGGCTTACTTTT
CAGCTGAGACTAGATTTAAGTGTTTGTTTTATGTATTATGACAATTCCTATTATGTTTTG
TTGAATCCCATAAAACTCAGAGGTTTATGAATCAATGTTGGACACAATC
