Microarray Probes on PGSC0003DMT400009514
Probe ID | Chip | Probe Sequence |
---|
CUST_7676_PI426222305 |
JHI_St_60k_v1 |
TCTGTAAGATTGGTGATAATGATGTGTTTCCGATTTGGGATACTGAGATTGAGAGCACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009514
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009514 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G75540.1 |
+1 |
2e-63 |
213 |
154/336 (46%) |
salt tolerance homolog2 | chr1:28366059-28367398 FORWARD LENGTH=331 |
Transcript Sequence (1584 bp)
>PGSC0003DMT400009514 1584 pgsc_dm_v3.4
TTTCAACGCACCCCAGTCTTTCCCTTCTTATAAGCTCTCCATTTCTGCACTTTTCTCTAT
CATCTTCTTCTTCAATTATTTTTTCTTCTTTTTATATATAATTTAATTAATCTAATGAAG
ATCCAGTGTGATGTGTGTAACAATAATGAAGCCTCTGTTTTTTGTGTTGCTGATGAAGCT
GCTCTTTGTGATTCTTGTGATCATCGTGTTCATCATGCTAATAAACTTGCTAGCAAACAT
CAACGTTTCTCTCTTATTCAACCTTCACCTAAACAAATACCAGTTTGCGATATCTGTCAG
GAAAGAAGGGCTTTTTTGTTTTGTCAACAAGACAGAGCAATTCTATGCAGAGAGTGTGAT
GTTTCAATACACAAAGCTAATGAACATACACAGAAACATAATAGATTTCTATTAACTGGT
GTCAAAATTTCAGCGAATTCTTCGCTTTATACTTCATCAGAATCAGCATCAGCAACTTCA
TGTAGTGCGAATCAAGATTCTGTTACAAATCTCAATAAGTCTCAAACTTGCACAAAAAAG
ACTTTGCCTGTTTCTGGTTCTGTTCCTCAACAAGTGTCAGTGGCAGTTAATATTGGGGAA
AATAGTTATACAAGTAGTATATCAGAGTACTTAGAGATGTTACCTGGATGGCATGTTGAA
GAATTGCTGAATTCCTCTACAATTCCTACTAATGGTTTCTGTAAGATTGGTGATAATGAT
GTGTTTCCGATTTGGGATACTGAGATTGAGAGCACAATGAATTCATTCTCACCAGAAAAT
TTAGGTATTTGGGTCCCTCAAGCACCTCCACCTCCTACTCCTCAAAAGAATCAGAACCAA
GTTTTCCCTCAGAATATAAACTTTGGTGGACAAATTGAATTCAAGAATATGAAGGAAGTT
ACAAGTAACAAGTCAAGTAGAAAGTGGAGAGATGACAATTCTTTTGCTGTTCCACAAATC
ATCCCATCATCATCTTCTATTTCCTTCAAAAGATCAAGAACTCTTTGGTAGTTGGATCCA
ATCATCTTTTTTTCTTTTAATTCCCTAGTTTGATTTTTTTTTCTATTTCTGTGGGTATTT
CTTTATTTTTTTTTGCCTTTTCTTGATTTAGTTTGAGCAACAAAAAAAAAATGAAAAAAA
AGAACACCCCATCTCCTCTTTTGTGCTCAATTAATACACAACTTGGTTTTGTTGTGTTCT
TGGAATTATTGTTTTGGTGCAAGGGCCTCTTTTGCTTTGTAAATATCTTTTTAGGCATAA
TACATAAACACACTCTCAAATTTAGCTTAAATTGTCAAGCAAATATTTCAATTTACAAAA
TGGCCTTCTAGGACTTTCAAAATTGATGTGTTACGTCAGTGTTGGATGTCCACAAGATAC
AATAAGCAAGGATGAATATTGGAATGCTTAGTTGCTAGTCGAGACCAAATTGAGGTGTTG
AGATATGTATTCTCAAAGTTAGAAGGCTTACTTTTCAGCTGAGACTAGATTTAAGTGTTT
GTTTTATGTATTATGACAATTCCTATTATGTTTTGTTGAATCCCATAAAACTCAGAGGTT
TATGAATCAATGTTGGACACAATC