Microarray Probes on PGSC0003DMT400009513

Probe IDChipProbe Sequence
CUST_7888_PI426222305 JHI_St_60k_v1 TCTTGTAGATTGGTGATAATGATGTGTTTCCGATTTGGGATACTGAGATTGAGAGCACAA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009513

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400009513 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G75540.1 +1 5e-55 192 115/207 (56%) salt tolerance homolog2 | chr1:28366059-28367398 FORWARD LENGTH=331

Transcript Sequence (1822 bp)

>PGSC0003DMT400009513 1822 pgsc_dm_v3.4
TTTCAACGCACCCCAGTCTTTCCCTTCTTATAAGCTCTCCATTTCTGCACTTTTCTCTAT
CATCTTCTTCTTCAATTATTTTTTCTTCTTTTTATATATAATTTAATTAATCTAATGAAG
ATCCAGTGTGATGTGTGTAACAATAATGAAGCCTCTGTTTTTTGTGTTGCTGATGAAGCT
GCTCTTTGTGATTCTTGTGATCATCGTGTTCATCATGCTAATAAACTTGCTAGCAAACAT
CAACGTTTCTCTCTTATTCAACCTTCACCTAAACAAATACCAGTTTGCGATATCTGTCAG
GAAAGAAGGGCTTTTTTGTTTTGTCAACAAGACAGAGCAATTCTATGCAGAGAGTGTGAT
GTTTCAATACACAAAGCTAATGAACATACACAGAAACATAATAGATTTCTATTAACTGGT
GTCAAAATTTCAGCGAATTCTTCGCTTTATACTTCATCAGAATCAGCATCAGCAACTTCA
TGTAGTGCGAATCAAGATTCTGTTACAAATCTCAATAAGTCTCAAACTTGCACAAAAAAG
ACTTTGCCTGTTTCTGGTTCTGTTCCTCAACAAGTGTCAGTGGCAGTTAATATTGGGGAA
AATAGTTATACAAGTAGTATATCAGAGTACTTAGAGATGTTACCTGGATGGCATGTTGAA
GAATTGCTGAATTCCTCTACAATTCCTACTAATGGTTTCTGTAAGGTTTGCATTTTGTGC
TCATTTTCAATCTTATAACTGGTAAAATTATTGTTATGTGATCAACAGATTATTGATTCG
AGCTGTGAAAATAGTCTTTTGTAGAAATACAGAGTAAGGCTATTGTACAATAGACCCTTG
AGGTCCGATCCTTTTCCACATAGCTGAAGCTTAGTGCATTAGACTGTCATTTTTGTCAAA
TGGTTGTGAAATGCAATTATCTGATCTATTTTTTTTCTTGTAGATTGGTGATAATGATGT
GTTTCCGATTTGGGATACTGAGATTGAGAGCACAATGAATTCATTCTCACCAGAAAATTT
AGGTATTTGGGTCCCTCAAGCACCTCCACCTCCTACTCCTCAAAAGAATCAGAACCAAGT
TTTCCCTCAGAATATAAACTTTGGTGGACAAATTGAATTCAAGAATATGAAGGAAGTTAC
AAGTAACAAGTCAAGTAGAAAGTGGAGAGATGACAATTCTTTTGCTGTTCCACAAATCAT
CCCATCATCATCTTCTATTTCCTTCAAAAGATCAAGAACTCTTTGGTAGTTGGATCCAAT
CATCTTTTTTTCTTTTAATTCCCTAGTTTGATTTTTTTTTCTATTTCTGTGGGTATTTCT
TTATTTTTTTTTGCCTTTTCTTGATTTAGTTTGAGCAACAAAAAAAAAATGAAAAAAAAG
AACACCCCATCTCCTCTTTTGTGCTCAATTAATACACAACTTGGTTTTGTTGTGTTCTTG
GAATTATTGTTTTGGTGCAAGGGCCTCTTTTGCTTTGTAAATATCTTTTTAGGCATAATA
CATAAACACACTCTCAAATTTAGCTTAAATTGTCAAGCAAATATTTCAATTTACAAAATG
GCCTTCTAGGACTTTCAAAATTGATGTGTTACGTCAGTGTTGGATGTCCACAAGATACAA
TAAGCAAGGATGAATATTGGAATGCTTAGTTGCTAGTCGAGACCAAATTGAGGTGTTGAG
ATATGTATTCTCAAAGTTAGAAGGCTTACTTTTCAGCTGAGACTAGATTTAAGTGTTTGT
TTTATGTATTATGACAATTCCTATTATGTTTTGTTGAATCCCATAAAACTCAGAGGTTTA
TGAATCAATGTTGGACACAATC