Microarray Probes on PGSC0003DMT400009513
Probe ID | Chip | Probe Sequence |
---|
CUST_7888_PI426222305 |
JHI_St_60k_v1 |
TCTTGTAGATTGGTGATAATGATGTGTTTCCGATTTGGGATACTGAGATTGAGAGCACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009513
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009513 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G75540.1 |
+1 |
5e-55 |
192 |
115/207 (56%) |
salt tolerance homolog2 | chr1:28366059-28367398 FORWARD LENGTH=331 |
Transcript Sequence (1822 bp)
>PGSC0003DMT400009513 1822 pgsc_dm_v3.4
TTTCAACGCACCCCAGTCTTTCCCTTCTTATAAGCTCTCCATTTCTGCACTTTTCTCTAT
CATCTTCTTCTTCAATTATTTTTTCTTCTTTTTATATATAATTTAATTAATCTAATGAAG
ATCCAGTGTGATGTGTGTAACAATAATGAAGCCTCTGTTTTTTGTGTTGCTGATGAAGCT
GCTCTTTGTGATTCTTGTGATCATCGTGTTCATCATGCTAATAAACTTGCTAGCAAACAT
CAACGTTTCTCTCTTATTCAACCTTCACCTAAACAAATACCAGTTTGCGATATCTGTCAG
GAAAGAAGGGCTTTTTTGTTTTGTCAACAAGACAGAGCAATTCTATGCAGAGAGTGTGAT
GTTTCAATACACAAAGCTAATGAACATACACAGAAACATAATAGATTTCTATTAACTGGT
GTCAAAATTTCAGCGAATTCTTCGCTTTATACTTCATCAGAATCAGCATCAGCAACTTCA
TGTAGTGCGAATCAAGATTCTGTTACAAATCTCAATAAGTCTCAAACTTGCACAAAAAAG
ACTTTGCCTGTTTCTGGTTCTGTTCCTCAACAAGTGTCAGTGGCAGTTAATATTGGGGAA
AATAGTTATACAAGTAGTATATCAGAGTACTTAGAGATGTTACCTGGATGGCATGTTGAA
GAATTGCTGAATTCCTCTACAATTCCTACTAATGGTTTCTGTAAGGTTTGCATTTTGTGC
TCATTTTCAATCTTATAACTGGTAAAATTATTGTTATGTGATCAACAGATTATTGATTCG
AGCTGTGAAAATAGTCTTTTGTAGAAATACAGAGTAAGGCTATTGTACAATAGACCCTTG
AGGTCCGATCCTTTTCCACATAGCTGAAGCTTAGTGCATTAGACTGTCATTTTTGTCAAA
TGGTTGTGAAATGCAATTATCTGATCTATTTTTTTTCTTGTAGATTGGTGATAATGATGT
GTTTCCGATTTGGGATACTGAGATTGAGAGCACAATGAATTCATTCTCACCAGAAAATTT
AGGTATTTGGGTCCCTCAAGCACCTCCACCTCCTACTCCTCAAAAGAATCAGAACCAAGT
TTTCCCTCAGAATATAAACTTTGGTGGACAAATTGAATTCAAGAATATGAAGGAAGTTAC
AAGTAACAAGTCAAGTAGAAAGTGGAGAGATGACAATTCTTTTGCTGTTCCACAAATCAT
CCCATCATCATCTTCTATTTCCTTCAAAAGATCAAGAACTCTTTGGTAGTTGGATCCAAT
CATCTTTTTTTCTTTTAATTCCCTAGTTTGATTTTTTTTTCTATTTCTGTGGGTATTTCT
TTATTTTTTTTTGCCTTTTCTTGATTTAGTTTGAGCAACAAAAAAAAAATGAAAAAAAAG
AACACCCCATCTCCTCTTTTGTGCTCAATTAATACACAACTTGGTTTTGTTGTGTTCTTG
GAATTATTGTTTTGGTGCAAGGGCCTCTTTTGCTTTGTAAATATCTTTTTAGGCATAATA
CATAAACACACTCTCAAATTTAGCTTAAATTGTCAAGCAAATATTTCAATTTACAAAATG
GCCTTCTAGGACTTTCAAAATTGATGTGTTACGTCAGTGTTGGATGTCCACAAGATACAA
TAAGCAAGGATGAATATTGGAATGCTTAGTTGCTAGTCGAGACCAAATTGAGGTGTTGAG
ATATGTATTCTCAAAGTTAGAAGGCTTACTTTTCAGCTGAGACTAGATTTAAGTGTTTGT
TTTATGTATTATGACAATTCCTATTATGTTTTGTTGAATCCCATAAAACTCAGAGGTTTA
TGAATCAATGTTGGACACAATC