Microarray Probes on PGSC0003DMT400009194
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5263_PI426222305 |
JHI_St_60k_v1 |
TCCTATAGATATCGATCCGAGGCTTACATTTGCTTCACTTTTGAAGGTATTGTCTGGGCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009194
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009194 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66190.1 |
+1 |
2e-45 |
166 |
87/137 (64%) |
ferredoxin-NADP(+)-oxidoreductase 1 | chr5:26451203-26453012 REVERSE LENGTH=360 |
Transcript Sequence (1795 bp)
>PGSC0003DMT400009194 1795 pgsc_dm_v3.4
GGAGTACTGAATGATGCTTGGCCTGTACTTGATCCTTATGTAACTTCAAATGTTACATAT
TGCAGGTGACTTGAAGCCTGGAGCAGAGGTCAAGATTACTGGACCTGTAGGCAAAGAAAT
GCTCATGCCTAAAGATCCAAATGCCACCGTTATAATGGTGAATTTTATTTGTAGCTACAT
TATTGTCATCTAAGATATATCTGCTGCCTTTCAATTTGACTATGCATTTTTTCTAATTTG
AATTTCTGTCTCAGCTTGCCACTGGAACTGGAATTGCTCCTTTCCGTTCATTCCTGTGGA
AAATGTTCTTTGAGAAACACGAGGACTACAAGGTACAGAAAATAAACATTTGTTTGATAG
TTTCTCTTCATTCTAATTTGATTGGCTTCATGGACATGCTAGTGAATTGAAAAGAACTAA
AGGAACACTGCTTGATTATAGGCAAAAGCTTTTGCTTGTGTGAACTAAAGCTCCAGAAAC
AATTGGCCAGTCTGATGATTCTTTAAAGTGTATCAAATGAGATAAAGTTAGGTATAAAAG
TGGAGAGTTTTAGATGGACGAAATGGTGAACTATAAAGTGTTGTCTGAGTCGAGGATGAA
TGGTTCTTAAACATTTAAAAATATCCAACATTGGTTTATTCAAAGGTTGTGGGATTACAT
TGGGTATGTTGTTGTCGCTATAGTTTATCCAAAGGTTCGGCAGAATTTCATTGTAGTCAT
ATGTAGCATTTTCTTACCTCCGATCATTAATCTGCTGAATGACATAGATTTGGTGTTATG
TAGTTCAACGGTACCGCATGGCTTTTCTTGGGTGTTCCCACCAGCAGCTCACTACTTTAC
AAGGAGGTGATTTTCTAGCATATCAATACTTTTTTATCTCCACAGTTTACTCAGCTGAAT
CAAAGTATTTCTGGCAAAGTTGATCATATTTTGAAGTTGGGACTTTTCATGTTGTAGGAA
TTCGAGAAAATGAAGGAGAAGGCCCCAGAAAACTTCAGATTGGACTTTGCTGTGAGCAGA
GAGCAAACGAACGAAAAGGGTGAAAAGATGTACATTCAAACCAGAATGGCTCAATATGCT
GAAGAACTATGGACTTTGCTCCAAAAAGACAACACCTTCATCTACATGTGTGGACTCAAG
GGCATGGAGCAGGGAATTGATGAAATTATGTCTGCTCTTGCTGAAAGAGATGGTAACATA
TGTCAAAACTATGTCGTCATTTTTTCCACACATTGATACAATCCTTATACTTAACTCATT
CATTATAAATATGCATTAATCAGTTGGAACTAATATAACCGACCCCAACTTGCTTGGGCT
TAATGTTGAAATTTGGTAGAATCTTCATCTACTGTCCTATAGATATCGATCCGAGGCTTA
CATTTGCTTCACTTTTGAAGGTATTGTCTGGGCGGACTACAAGAAGCAATTGAAGAAGGC
AGAGCAATGGAATGTTGAAGTCTACTAAATATTTTTACTTTTCTTTGTACAAATATGAGC
CACCAACTTTATGCTTCTCTCCCCCTGCATCCATGTAGATAGGTAAATTTTTCCTTTGAA
ATTTTAATTTCATTTTTTGGGACTTCCCTTTTTAAATCTTTCATCTGTATCTTTTAATGA
ATCAGTATATTCGCATTTGTCCCTCTAAAAAGTTCAATTTTGAGGGTCTGGGTCTCAATA
ACATATAGCTGAATCAACCCAATCACAATCTCTTGTTTTTTTATTTTCATAACTACAATA
TCCTTGTTGAGGTATGGGTCAATTAGTTTTATAGTTCCTTATGAATTTATTATTT
