Microarray Probes on PGSC0003DMT400008935
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18378_PI426222305 |
JHI_St_60k_v1 |
GTTGCCCTTTCTCTGTGAAAAGAAATCACTAATACTTTTTATGTGTCGATGTTGTGGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008935
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008935 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52820.1 |
+3 |
1e-43 |
159 |
86/226 (38%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317 |
Transcript Sequence (1546 bp)
>PGSC0003DMT400008935 1546 pgsc_dm_v3.4
TTTATTTCTTTCTATTTCCTCTCTATTTAATTTATTCATCAATGGCATCTACCAAAGTTA
AGATTCCCACCATAGATTTTTGCAATCTTGAGCTAAAACCAAACACTCCACAATGGGAAT
CAACAAAAGTTCAAGTTTTTGAAGCCTTAAAAGAATTTGGTTGTTTTGAAGCAATATATG
ACAAAGTTCCAAATGAAATTAGAGAGGGCATGTTTGATACTTTAAAAGAAGTATTTGATT
TTCCAGTGTCCAAATTGATAGAATATAGAGAAAAACCCCATTTATATGATGGGCAAATTC
CAAGTATACCACTCTATGGTAGTGTGAGCTCTGCTGATTTGGTCCTCCCAAATAGTGTTG
AAACATTTGCCAATACCTTTTGGTCTGATGGAAACCCTAACTTTAGCAATGTGGCAAAGT
CCTACTTCAAGCAACTTATGGAATTGAATGACATGGTGGAAAAAATGGTTTTGGAGAGTC
TTGGGAAAACAAATTACATTGATGAAATCTTGAATTCCAATGTTTTTGTGTCAAGATTTA
CTAATTACAAGGTAATTAAAGGTGAAGATGAGAATAGATCAGAATTACCTCCCCACACAG
ATAGTGGCTACTTGACTATAATTAAACAAAATCAAAATGGATTGCAAGTTCTCTACAAAA
ATGGAGAGTGGATAGAGCTCAATAATACAACACCAAATTCCTATATTGTTTTATCAGCAG
ATGCTTTCAGGGTAAGTTATTATTTATTTTTGAGTATCAAGGTAAAAAATACACCTAAAT
TATTTATTTATGTGTATTTTTGACGCTTAACTCTTTATTATTTTGTGTGTGAGGGGGTGG
GTTGATGCTATAGAAGAGGAGAATAAAAGAAATAGAGATTTTTTTGTATGGTTGATTATT
CAAGCCCAACTAGAAGCTAAGATCAGAGCAGTTTTGAAGTAACGATAAGATTGTTTGTAT
GTGATTTATAGATTACGATGCGGGCTTGATCGAGAAAAAATCACTAATATTTTGTATTAG
ATTAGATTGTTTTCCTAACATCCCTTGAGGTGTTGCCCTTTCTCTGTGAAAAGAAATCAC
TAATACTTTTTATGTGTCGATGTTGTGGATTTATACAGGCATGGACAAATGATAGTTTGA
CATCTGCTGAACACAGAGTAGTAACAACAGGAGACAAAGATAGACTATCTATTCAATTAT
TTTCCTTTCCCAAATCAAGATTTTGCTGTGAAGGCCCCAAAATAATTAGTGGATGAAGAC
CACCCTTACTCTTCAAGCCTTTTAACTTGCTTGAATTTCATAAATAAACTATGTCAGGTA
ATAAAAATTGAATTAATCTCAAGAATTATTGTGGTCTTTAAAAATTTAGTAGGGTATTTA
TTTATGTGTATTTTCTTTATGAATACAATGTATCGTATGCATGGGTGGTTGAAAATTTAT
ATTTGTGTGGTTATTGCATATGATTTCATAACGTATTGTATTGTGTTGTGTTGCGTTGTA
TTGTAATGTATTGTACTGTATTGTTTTTATTAAAAATATATTAGTG
