Microarray Probes on PGSC0003DMT400008561
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51153_PI426222305 |
JHI_St_60k_v1 |
ATTCTGGACCTAGCCCTGGCATGAACCATTAATTAATTATTATTGGTTAATCTAAGCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008561
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Source Transcript PGSC0003DMT400008561 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23270.1 |
+2 |
4e-06 |
42 |
27/57 (47%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9903311-9903571 FORWARD LENGTH=86 |
Transcript Sequence (426 bp)
>PGSC0003DMT400008561 426 pgsc_dm_v3.4
AAAATATTATAATATCAGATTATTATCTCCAAATTTGAGCAAATTTTCATCAAAAATGGC
AAGAGGTCTCAATATTTTTGCAGTGCTGATCGCGGTCAATGTCTTATTAAGCTCTTCACT
TTTCCTTAACAGCGAAGCTCGTCCTCTCAACGTTGTTAATGTTGATGGATTATATTTCGA
AGCAATCAAGACAGGAGGACCGAGTTCGAGGGGAGAAGGACACAAATACAGAGATGCTTC
AACTCTTGGAGGAGTCAAAAATTCTGGACCTAGCCCTGGCATGAACCATTAATTAATTAT
TATTGGTTAATCTAAGCTAGTATTATTATTAATAGTTTGCTGATTATTGATTTAATTACT
TAATTCATTACTTGTAACAATTTTTATTTCTTCATTTTTTTCGGTTTTAAGTATTATAAG
TTGTAG
