Microarray Probes on PGSC0003DMT400008502
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17345_PI426222305 |
JHI_St_60k_v1 |
CTCCTCAGGATACTTCAAGTTCAAGTTCTAACATCTCTTAGGACAAATCATTTTGTTTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008502
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008502 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G07020.1 |
+1 |
2e-53 |
179 |
120/147 (82%) |
proline-rich family protein | chr5:2180669-2182284 REVERSE LENGTH=235 |
Transcript Sequence (1048 bp)
>PGSC0003DMT400008502 1048 pgsc_dm_v3.4
ATAACCCACTCAACGTGCATTCAAATCAAACCACAAAAACTAAACCATAAGAGGATTTTG
GAGGCTCAAACACAGCCAATCGAAGAAGCAAGAGATTTCTACAAGTGGTTCTGCTTCTTC
ATCACTTCAATATACCTAAGAGACACCACCATTTTTGGGCTACAAACGAATTTGCAGATA
ATGGCTTGTGCTGCTTTATCAGCAAACAGCTGCACCATAGCTTCATCTTCCAGTGGAAGA
TTGAGCTTTTCCACATACCAAAAGGACTCAAAATTGAGGCAAAGACAGAGTCTCGTTCGA
TTCAGAATTCGGGCTTCAACTGATGATTCTGATTGCAATGCTGAAGAATGTGCCCCAGAG
AAGGAGGTTGGGAAGGTGAGCATGGAATGGGTAGCCATGGACAACACCAAAGTGGTTGGG
ACATTTCCACCCCGTAAGCCGCGTGGCTGGACAGGGTATGTTGAGAAGGATACTGCTGGG
CAGACAAATATATACTCTGTTGAGCCCGCAGTTTATGTAGCAGAAAGTGCTATCAGCTCT
GGGACTGCAGGCACCTCATCTGATGGAGCAGAGAACACCGCAGCTATTTCAGCTGGGATA
GCCTTGATCTCTGTTGCAGCTGCTTCATCAGTTCTCCTTCAAGTTGGGAGGAACTCACCT
CCTCTGGTACAAACAGTGGAGTACTCGGGACCATCCCTTAGCTACTATATCAACAAGCTT
AAGCCAGCGGAAATAGTCCAAGCTTCAATAACCGAAGCACCAACTGCACCAGAAACCGAA
GAAGTAGCAAATGCACCAGAAGTTGAAAGCTCTGCTCCTGAAGCTCCTGCTCCACAAGTT
GAAGTCCAATCTGAAGCTCCTCAGGATACTTCAAGTTCAAGTTCTAACATCTCTTAGGAC
AAATCATTTTGTTTACTTGTATATTTTTATTTGTAGATGACCTAGTATACATATTTCAGT
AAGTTTTTGTAATACTACTATTCAAAGAGAACTATTCTGCGTGTCGAAAATCAATTATGA
ATCCTTAATTGAGTTAGCTCAATGATCA
