Microarray Probes on PGSC0003DMT400008451
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41174_PI426222305 |
JHI_St_60k_v1 |
ATTCAAAGCTAATGAACTTTGATTCTCCTTGCAGGTTAGTGTAGATTATTTAACGAAGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008451
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008451 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G29590.1 |
+2 |
2e-48 |
176 |
80/91 (88%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:14512736-14514404 REVERSE LENGTH=317 |
Transcript Sequence (2737 bp)
>PGSC0003DMT400008451 2737 pgsc_dm_v3.4
CCGTCATTTTGATTAACCGTAGAATTTGTAGAAAGGGTTTTAAGGCAAGTCAAATAAGGT
CGTCAAATTCATTTACTTTAGACTGAAAGTTCAAGGTGATGGATTAATACAAGAATGTAA
TATGCTACAAGGAAAAAGGGAATTCAATTGAGGGGAAGATTTAGAGCCTTTCCCCAAGGA
AATTCTAAGGGAAGAATGTAAAAAAGACTAGTGTATCACTCTCCTAGATTTTTCGATGCC
TTCTATTCTTGTAAGAGTCCTCTTTTATAGGCCATAAGAGTCGAACCATCGCGTCAATAT
GAAACAGAATGCATGCTTAGCACTGAAAAGGCTACCTAGTAGCACGTGCCTACTCTCTGA
CGCTTTGCCTGGAATGATTGGGGGCAGGTTGGCCCACAACTTGAGATTGATTGTTAATTC
CACCCGAGAATCATTATAAGGGTGTCCAACTGAAGATGGCCTTCCCCGGGGAAAGGTCTT
GTAAGATTTCCGGTCACATGGCAACTTTATATGATCATATGTCAACACCCCGGGTCGCAC
CGGGAACAGTCCCTCCCAATTTCCCCGGGTTATAACAAGCATTTCTTGGTCTTGATTTTA
CCACGTGTCACAGTCTAGTTCGTCAGACGTATTTTTTTCCCCATACAGATAGTTCCCCAC
TTTACAGACACCTAATGAAATGTATCCGGGAAGTGGAATTTGCTGTGCTGTTTTCGGGGC
TGACGATGATTGATTGCTACTGCATATAATGGGGCTTTTGGTTCGTTGCACTTAGACCGT
CCTGTCACGTACCTCTTTTCACTTGGATCATCGTAGACATTGGATTTTAAAGCCATCACG
AATACCTTTTGACAAAGAATCCTGTGTTTGGTTCCTTGTTAAAAAGCTTACGAAATAAAA
CTCCTCCAGGACAAAAGACCTTACCAAGGCAAAGAGTGTAACATATGCCTTTTGGCTTCC
TCAAGAATTTGGCTACTACAGAATCGAGGATCAGCAGCCTGTCATCGTAAGCTATCTTCC
TTAAGTCTTTTAATCTGACGTGCTTTCGGTCATCCCTTATCCTTCGGTGTCCTTGCCCTT
TCCTATATTAACAACTTCTTAAAAATGGTTAGCCCAAATTAAAAGGGATTTTATTTGATC
ATGCGGGAGCATGTGATCCTGTCTAGCCATTGAATGGAGGTGAGCCTCTTCACTGCTCAT
AAAGTAATATTTGTTTCCTAATAACTGATGGGATTTCCCCGTGGACACTTAGTCAGCCTT
TCAAAGTTTTGGTTGTTGATCTGGTGACCCCCCCTGCCCAGAGTTGTCCCAGATGCGTTT
GAATTTGCGTCTGTCTTAGCAATCGGGGAAAAAACCCTCAATTTGTTTGAGAGTGTTTGG
GCATTAGTGTCAGACTTTTTTTCTAAAGGAGAATACTTTACCGTAAGGGTCAACCGTCTC
AAACCTATTCAAATCTATATTCATTTTAGAGTAATGGGGGATGATCATCTGAATAGCATG
AGAGAACACTTAACCATAAAGATCAGCCGCTTCCATCCTTGTTCGGAATTATGTTTTGTA
TTAACTTGTTGGCAAGAGTACTCCTGGATTAGAAGGATGATCCCTTGGCAGGTCGCAAAA
GACCCATTTCATTCCATGGCCTTCTTCCTTGGGGTCGAGTTCTTGACTAAATCTGAGTAT
GTGACATCAACCACGAATTATTCTTGGGAAATGACCATTCGGTACATAAAGAAGAAAGAT
AGGGGAGGGACCCCGTTTCTTCATAAAGAAGAGACCTTTATTTTGTTTAGGTGCTCTCGA
GCAGGAAGTCTTGACTCCATTTTTAGGCACAAGGTTTCTTGGAACCTTCTTACGGTATGA
GTCCAGAGGCTGCATCATTTAGCGGGAGGTTTTACGATTTTGAGTATGTAGTTTGTATCA
TTTGGCGATTTGAGTCCAGAGACAACATCATGGGTGGGAGCTTTTACAATCTGAGTTCAG
AGATTTTATTTGTTGGCGATTTGAATCTGGAGAATGCACCTTGCAAGTTAGACAACTATC
CTACCCTGATGTTGAGAGCCTGTGATAAGTTATAGACAACACTTGGGATGATTCAACATC
ACATCATGTACTTCAAATCTTAAGTTTGCATCATTGTCATAAATGTATCATTGTTCTAGC
AAAAACAAAATTCAAAGCTAATGAACTTTGATTCTCCTTGCAGGTTAGTGTAGATTATTT
AACGAAGCCTCTTGATGTTTTCAAAGAAATGTCGCGTGTTCTTAAACCTGGTGGACTTGC
AATTATGAGTTTCTCGAATCGCTGCTTTTGGACAAAGGCTATCTCGATATGGACATCAAC
TGGAGATGCTGATCATGTTATGATTGTTGGGTCCTATTTCCATTATGCTGGTGGATTTGA
ACCTCCACAGGCTGTGGATATATCTCCTAACCCTGGCCGCTCAGACCCCTTGTATATAGT
CTATTCCAGGAAGATAGCGACAGCCTGAAATTCAACGCTCGTCCAGCTATAGAGTTTTCT
TGTGCCATTGATCACATCATAATGTATAGTGAGGAGTAAGTGAAAGGTGATTGATAACAT
TTTCCTTCATAAAATGTGATCACGATCCCGTTTTAACTATCATAACTTGATGGAGTTGTG
TATATTTTTAAGTTGAGGATAAATTTTGAGGAAAGAAACAAGTCCAACATCACAGATCAC
AAACACCTAATTCAAGACGCCATCTAGTCTTAACAAT
