Microarray Probes on PGSC0003DMT400008365
Probe ID | Chip | Probe Sequence |
---|
CUST_17386_PI426222305 |
JHI_St_60k_v1 |
AACACCATCATCTGAATTTCCATGTTCAATTTCATTTTCCATTTCATCATACGAAGGAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008365
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008365 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G00880.1 |
+1 |
1e-30 |
112 |
53/100 (53%) |
SAUR-like auxin-responsive protein family | chr4:366692-367060 REVERSE LENGTH=122 |
Transcript Sequence (688 bp)
>PGSC0003DMT400008365 688 pgsc_dm_v3.4
TCTTAATTATCTCATAGATATTATGAGCAACATACCTAAATCTCTAACCGACTCTTCTCT
CACCCTCTTCAATCTAGCTATCTTTTCTTCTGATCCTTGGCCTTTCTCTTTCTGATCAAT
TAATTTCTCCTAATTTTTCTGATTCAGCTTTCCATAAACTTGAACAATTTATCAATGGGG
AGTGGAAATAAACACCATCATCTGAATTTCCATGTTCAATTTCATTTTCCATTTCATCAT
ACGAAGGAGGAATTGAGGGATACAGTACCGAGAGGATGCGTTACGGTGTTGGTGGGTCAA
GGTGAGGAGGAGCAGCAGAAATTCGTGATACCAGTAATGCATATTAATCATCCTCTCTTC
ACACAATTGTTAAAAGAAGCAGAGCAAGTCTACGGATTTCATCATAATGGTCCCTTAAAT
ATACCCTGTAATATCGACCAGTTTCGCTATGTTGAGGGAATGATTGATAAGGACGTTCAT
CACCACCACCATCATCACCTGTGCTGCTTCAAAGCCTGATTTTATTACATCTTGCTTGTA
TATATGTAATATAGTATTACTAATGACGACGATGAAAATTATTTATATGCAATAATATAT
AGTTGTAAATATTTGTAGTTTGATTTCTCAGATGATCAATTAGTTATACTTTATTTGTTG
AGCAATATGGTCGCGATATACAACTCAC