Microarray Probes on PGSC0003DMT400008182
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17403_PI426222305 |
JHI_St_60k_v1 |
CTACGCAAAGTCCGTAATTGTATCGAAGATCACTTATGCTAAAAGTCTTTAACAGTATTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008182
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008182 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G65060.1 |
+2 |
0.0 |
682 |
372/535 (70%) |
4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561 |
Transcript Sequence (2213 bp)
>PGSC0003DMT400008182 2213 pgsc_dm_v3.4
ATTTTGTTTTGGTGTGGTAGACTCCCAAGTCCTCTTTGTCATCCTCCTCAATGCCAACGT
AACTACTCAATTACCCTTTTGTTCTTCTTTCTCAACCAAGCCACACGTTTAACTATTCAC
CTAACTTTCTCCACCTTACTTTCAATTGTATTTATATCACCTTCTCTTCTTCCTTTTATA
CCAATCTCTCTTACTTTTCTTCTCTAACTCATAAATTTTCTTCTTTTCAACTTTTTTTCT
CATAAAAAAGCAACCAGAAATGGTGAGTGTAGCTACTGTTGATGCCCAAAAAGCAGAGGT
ATTATCTTCTGTAATTTCTCCGAATCAAAATCAATCTTCAGAAGAGCTACATGTATTCAG
ATCAAAATTACCAGATATATCAATTTCCAATAACATACCACTCCATGTCTACTTGTTCGA
AAGGCTATCGGAGTTTGAGGAGCGGACTTGTCTTATAGCAGGCAACAGTGGAGAAACATT
CACTTTTGGTGAAACGCATCTCATCTGCCAGAAAATTGCTGCTGGTTTAACGAAGGTAGG
GATCAAAAAGGGAGATGTTATCATGACTTTTCTACAGAACTGTTCGGAATTTGTGTTTAC
TTTTCTAGCATCTTCTATGATTGGAGCTGTTATCACTACGGCTAATCCGTTCTACACGAA
ATCGGAAGCGTTTAAGCAGTTGAAAGCTTCGAATGCGAAATTAATAGTTACTCAATCGCA
GTATGTGGATAAATTCCGTGATCCCGCGGAAAATGATCCGAAAATTGGGGAAGATTTTTC
GGTCGTTACAATTGATGATCCGCCGGAGAATTGCTTGCATTTCTCTGTGCTATCGGAAGC
TAAAGCAGAGGATATGCCAAAAGGAGTTGTTATCCATCCTGACGATCCCGTGGCTCTTCC
GTTTTCGTCAGGGACCACGGGGTTGCCAAAAGGAGTGATACTGACTCATAAAAGCTTGAT
TACAGGGGTGGCTCAATTAGTGGATGGCGACAACCCAAATTTTTACTTGAAGCACGACGA
TGTGGTGCTATGTGTGCTTCCTCTGTTTCATATATTCGCGTTGAATTCAGTGCTTTTAGT
GTCGTTAAGAGCTGGAGCTAGTGTTCTGTTGATGCAAAAATTCGAAATTAGTGCGCTGTT
GGAGCTGATACAAAAACACCGTGTCTCAGTCGCTGCTGTAGTTCCGCCCCTGGTTCTTGC
ATTGGCGAAAAATCCAATGGTGGATTCGTTCGATTTGAGCTCGATACGGCTCGTGATGTC
CGGGGCTGCGCCGCTAGGGAAGGAGCTGGAGGAAGCACTCCATAGAAGAGTGCCCCAAGC
CATATTTGGACAGGGATATGGTATGACAGAGGCAGGACCAGTAGTAACAATGTGTCCAGC
ATTTGCAAAGCAACCATTATCAACTAAATCCGGTTCATGTGGCTCTGTGGTTCGAAATGC
GGACCTCAAGGTGGTTGACCCGGAAAACGGTGGCTCCCTTGACCGCAACCAACCCGGTGA
AATTTGCATTCGTGGTTCCCAAATCATGAAAGGTTATCTGAATGATGATGAGGCCACTGC
ACGGACCATAGATGTCGATGGATGGCTCCACACCGGCGATATAGGATATGTAGATGACGA
TGATGAAATATACATTGTCGATAGAGTCAAAGAGCTCATAAAGTTTAAAGGTTTCCAGGT
GCCACCAGCTGAGCTTGAGTCTCTTCTAATAAGCCATCCAGAAATTGCAGATGCTGCTGT
TGTGCCGCAAAAGGATGGCGCTGCAGGGGAAGTCCCGGTTGCATTTGTAGTCCGTTCGGC
CCAAGGTTTTGATCTTACTGAAGAAGCTATAAAGGAATTTATCGCCAAACAGGTGGTATT
CTATAAAAAATTGCACAAGGTGTATTTTATTCACGCGATTCCGAAGTCTCCATCTGGAAA
GATACTAAGGAAAGATTTGAGAGCCAAACTAGCCGCGACACCACAGTGATAATGCACTCC
GTCTACGCAAAGTCCGTAATTGTATCGAAGATCACTTATGCTAAAAGTCTTTAACAGTAT
TGTATCAAAGTCTTATATATCCAATGACTAATTCTTTGAATGTTGATTTACTTCTTTTTT
TTAAAAAAAATTCTTCACTTTTTGTGTGAATTTTCTGGATTCTTTGAAAGGAAAACTTTC
AGTTTTATAAATTCATGCACCATTATTTATTACTCTTCCAAATTCCATGTACC
