Microarray Probes on PGSC0003DMT400008033
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41400_PI426222305 |
JHI_St_60k_v1 |
GAGTATTCATAATATATCAAGTTCATGAGGGCTTTGTGAAGCTTCTCACTTTACTGTCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008033
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008033 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G58290.1 |
+1 |
6e-155 |
469 |
265/375 (71%) |
Glutamyl-tRNA reductase family protein | chr1:21624028-21626051 REVERSE LENGTH=543 |
Transcript Sequence (2654 bp)
>PGSC0003DMT400008033 2654 pgsc_dm_v3.4
ATTCCACCATTATTATCGTCGATTCCGTCCAAATAAATAAAATTGCCTAATTATATTAGC
CCACCACTCACCAATTATTGTTTTTTTTTATACCAAACCCATCACCTCCATACCTATTCC
ATTCTGTCACCTGTTCCGAATTTCGATTACAAATCTGGGTTTCGGAGCTCTCTCGCCATA
GCCGCTATTGCTGTTTTCTACAAATTGTGTTTCAATGGCGGTTGCGAGTAGCTTTGTGAC
AGGTGGCAGTTTCAATTGTGATTATTTAAGTTCTACGTCTTGTTCTTCGTCGTCTTCTCC
TTCTGTGGATCATCAAGTTAGATTTTTCGGGAGTCGTCGAAGAATTAAGCCGCTGGTATA
TTGGACGAGATCGCATTCGTTGAGCCCTAAATGTGAGTTATCATCCAACTCGGTGGTGAA
AAATGGCAAAAAGGAATCTAGAACATCGAGTCTTTCTGCTTTGGAACTTCTCAAAACATC
TGCTGCTGATCGATATACAAAGGAGAGTAGCAGCATCATGGTTATTGGACTTAACATTCA
CACAGCACCAGTTGAAGTGCGGGAGAAAGTTTCTATCCCAGAAGCACAATGGCCTCAAGC
AATTCGCGAACTGTGTTCCTTGAATCATATAGAGGAAGCTGCTGTATTGAGTACTTGTAA
CAGAATTGAAATATATGTTTTGGCGCTTGCCCAAAATCGTGGAATTAAAGAAGTGACTGA
GTGGATGTCTAAGGTAATTTTTTCTTCAAGCATCATTTATCTGCATAATGTTTCCTTTTG
TTGACTAACATCTTAAATCTGTATGATAAACTAGCAACACTGTCATTGAAAACTGCATTA
AACTCTAATGAGCATCATCTACCCTATGTCGCTTGCAGTAAGATTTGAACAAATTCATGT
TGGTTTCAAAGGTTTAGGAATTACCTTACATATTCTCCATCATGAAAGATACACTTGAAC
GATAAACAAAATATTTTGACTTGCTGTGCCATTTATACTCTGTATTTCTACATTTGCGAA
GGAATTGTATTTATTTTACTGTGCTTTGGTTCCCCTGCTCACTAACGTCATTGCAAAGGT
CTAACTACTTAAGCACAAATTTCAAAGAAATACAGCCCTATGCTACAATGTTCACTTTTT
GTTGTACTTTATATGCAAACCTATTTTGACACAAATATCTTTGTTTGGCAGTTTAGTGGA
GTTCCAGTTACAGAGCTATGCCAACACCGGTTTTTGCTATACAATCAAGATGCCACACAA
CACCTGTTTGAAGTAGCTGCTGGACTAGATTCCCTAGTCCTGGGAGAAGGTCAAATTCTT
GCACAGGTCAAGCAGGTTGTTAAGAATGGGCAGGGGGTCCCTGGCTTTGGTAGGAAAATA
AGTGAGCTATTTAAGCGTGCAATCACAACTGGTAAGAGGGTAAGAACTGAGACCAATATC
TCCAGCGGATCAGTATCAGTCAGTTCAGCGGCGGTGGAGCTTGCTCTGCTGAAACTTCCA
GAGTATTCTTCTTCTACGGCTCGTGTGTTAATTGTTGGAGCTGGCAAGATGGGAAAGCTT
GTGATCAGACATTTGGTTGCTAAAGGGTGTAAAAAGATGGTTGTCGTTAACAGGACAGCG
GACAGAGTTGCTGCCATCCGTGAGGAGTTGATGGATGCTGATATAGTATACAAGCCTTTC
TCAGAATTATTAGCATGTGCTGCTCAGTCTGATGTAATATTCACCTGCACTGCTTCGAAA
GCTCCTTTATTCATAAAGGAGAGTGTTCAAGCTCTCCCTTCTGTGAACTCTGAAGATGGG
TGCCGGAGGCTATTTATTGATATTTCTGTTCCTCGGAATGTGGAACCTAGTGTCGCAGAA
CTTGAAGGTGCAGGTGTTTACAATGTGGATGATCTTAAAGAGGTTGTGGAAGCTAATAAG
GAGGATCGGTTGCGGAAGAAAATGGAAGCTGAGACCATCATTGCTGAGGAAGTGAAACAA
TTTGAAGCACTTAAAGACTCCCTTGAGACCGTTCCAACTATAAAAAAGCTCAGGGCATAT
GCTGAAAGAATTAGGTCTGCTGAGGTTGACAAATGTTTGTCTAAGATGGGTGATGATATC
CCCCAAAACAAGAAGAAGGCTATCTATGATCTCAGTCTAGGGATAGTAAACAAGCTGCTA
CACGGACCAATGCAGCATCTAAAATGTGATGGAGCTGAAAACCGAACTTTGAGTGAAATA
CTTGAAAATATGCACGCTCTTAACAGAATATTTGGTCTTGATACTGAGATGTCTGTATTG
GAAGAGAAAGTACGAGCCAAGATAGAACAAAATCAAAAGCAATCCTCTTGAGGTTCTTTT
TCCATTCAGCTAGAAAAGGTCAATAACGTTCAGCAAAGTTCAATCAGGAATGATCATCGT
TTCAGATCCTTTCCTGACAGTTTGCTAGTTTTAACTGTATCAAATTAGAGTACACAGAAC
ACGATGAGATTATTTTTTTTAGGCCATAGGTAGCCAACATTACACGAGGGATTCCCTCAG
ATTGCGGGAAAGTCTGCCATAGTTGCAGTTGTATTTCTTACGGAAGAGTATATATCCATT
TGTTGAATCCAGAGGAGTATTCATAATATATCAAGTTCATGAGGGCTTTGTGAAGCTTCT
CACTTTACTGTCTC
