Microarray Probes on PGSC0003DMT400007592
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13157_PI426222305 |
JHI_St_60k_v1 |
GACCTGAAGATTATAGGCCTATTGCTTTGATATACTACTATTAGATGACCAAGTTTTTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007592
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007592 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19180.1 |
+1 |
2e-33 |
127 |
105/264 (40%) |
jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |
Transcript Sequence (1189 bp)
>PGSC0003DMT400007592 1189 pgsc_dm_v3.4
AGTTCACAAAAGCATTTCTTGCTATTTCAACTTTTCAAATATTTCATTTTTTGTTGCCGG
AAAAACAAGATGGGGTCATCGGAAAATGTGGATTCCGGCAAGGTGACCGGACAGAAATCT
CAGTTTTCTCAGACTTGTAACCTTTTGAGCCAATTCTTGAAGAAAAAAGGTTCTGTTGGA
GATCTTAATAATCTTGGTATCTACAAAACTACTTTTGAACCAACCGGATCTCAACAAACA
GCTACCACCACTACAACTACTATGAATTTGTTGCCAATGATTGAGAAATCAAGTGATTCA
TCGTCGTCATCGTCGTCCGTTGAAACAAATCCTCAAAAACCCATGAATCTTTTCCCTCAA
GAATTTGATTTCTCCAAAGAACAATCCACAAAAAAGACTGAATCTTGGAAATTTGATCAA
CCAGAAAAGGCACAAATGACCATTTTTTATGGTGGACAAGTCATTGTTTTTGATGATTTT
CCAGCTGATAAAGCAAATGAGATCATGAAATTAGCCAACAAACAAAACCCCACAAACAAC
TTCACTTATACTATGATGAAGAATCAAAAAACATCTGATCAATCTGGTGCAAATTTTGGT
AACAAATTGATTCAAGAACTCCCAAAGTGTCAAGTGTCAATGCCACAGCCTTCTGTTGCT
GATTTACCAATCGCGAGGCGGAATTCACTTACAAGATTCTTGGAGAAAAGGAAAGATAGA
GTAACATCAATTGCACCATACCAAATCTCCAGCAACAAGAAATCCAAGAATGAGGAAAAC
AAGGCATGGTTGGGATTAGGTGCTCAATTTGTTAAAACTGAGCAATACTTTTAGTTACTA
TTCTTGGATTTTCATTTTTTGATGATTGAAGAAGGGGAGTCTTGACGTGACGTAACTGGT
AAAGTTAGTGTTATGCGATCAAGATGTATCAGGTTCGAGCTGTGGAAAGGTGTCAGAGCT
TAGTACACCAGATTGACCTGAAGATTATAGGCCTATTGCTTTGATATACTACTATTAGAT
GACCAAGTTTTTGGTTTTTTTTTTTCTTTCTTTTTTTGGTTGGATTCAAGATTGATTGAA
GCCACTTTGATCTAACTATGAAATATTATTTTTAACATTTTTTTGTAATCAAGACTAAGG
ATGTTTGTTGTTAAGTACCTCATATCATATATATATGTACTATTATTTA
