Microarray Probes on PGSC0003DMT400007514
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13080_PI426222305 |
JHI_St_60k_v1 |
ACCGCAAGAGAGTCAAAAGTTCGTGTCAAGTCAAAACTAGACAAACAAATTCAAACGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007514
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007514 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19150.1 |
+1 |
7e-145 |
415 |
190/220 (86%) |
photosystem I light harvesting complex gene 6 | chr1:6612806-6613799 FORWARD LENGTH=270 |
Transcript Sequence (1112 bp)
>PGSC0003DMT400007514 1112 pgsc_dm_v3.4
GCCAAAAATATTATACATTTCTCTTTTAAAAAAATTTACACATTGCCTTTGTTTTAGTCC
TCATTTTCTTCCATGGCTTTAGCCATTCACTCCACAGCTTTTTCTAGCATCCCAATCAGG
GAGCTACCAACAAAAACTTTTTCTGGGAAATTTACAACATGCGTGTTGTCTAAAAAAAGT
AGATTGTATGCTGGTAAAGAAGTTTCAAGTGTTTGTGAACCACTTCCTCCAGATAGGCCA
TTATGGTTTCCTGGAAGTTCACCTCCAGAATGGCTTGATGGCAGTTTGCCTGGAGATTTT
GGCTTTGATCCACTGGGATTAGGATCTGATCCAGAGTTACTGAAATGGTTTGCTCAAGCT
GAGCTAATACACAGCAGATGGGCAATGTTAGCAGTAGCTGGAATTCTAATCCCAGAATGG
CTCGAAAGTCTTGGATTCATCGACAACTTTTCATGGTATGATGCTGGTGAAAGAGAGTAT
TTTGCAGATTCGACAACTTTATTTGTGGTGCAACTAGCCTTAATGGGATGGGTCGAGGGT
CGTAGATGGGCTGATATTGTCAATCCAGGATGTGTTGACATTGAACCAAAAGTACCTCAC
AAGAAGAAACCAAAAACAGATGTTGGATATCCTGGTGGATTATGGTTTGATCCATTTATG
TGGGGAAGAGGATCACCCGAACCGGTTATGGTGTTGAGAACTAAGGAGATCAAGAACGGT
AGACTTGCTATGTTAGCCTTCGTTGGCTTTTGTTTTCAAGCTGTGTATACTGGACAAGGT
CCTATTGAGAATCTAATGTCACATCTTGCTGATCCTGGCCATAACAACATATTCGCGGCT
TTTACATCCCAATGATGGTTTTATATTCAAGATATAGAAGAGATTCATGATGTTGATGTT
GATGTATTCATGTAAATGGAAAGGTTTCTGTAATTCATTCTTGACAAATATGACAATTCT
GTATATTACTCCGTTCGTTTCAATTTATTTGTCTTACTTTCCTTTTAGTGATATGTTTAA
GACTAGAAGATCTACACATCTTTACTTTTAACACCGCAAGAGAGTCAAAAGTTCGTGTCA
AGTCAAAACTAGACAAACAAATTCAAACGAAG
