Microarray Probes on PGSC0003DMT400007511
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13205_PI426222305 |
JHI_St_60k_v1 |
GAAGAAGAGAATTATTTGAACTACGATGGATTTCAATCACAAGGGACTTCATTTCTTTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007511
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007511 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19210.1 |
+2 |
6e-48 |
162 |
89/190 (47%) |
Integrase-type DNA-binding superfamily protein | chr1:6626973-6627530 REVERSE LENGTH=185 |
Transcript Sequence (1001 bp)
>PGSC0003DMT400007511 1001 pgsc_dm_v3.4
GCCAATTCCAAATTTTAACAACAACCCACATCAATTTTCATCAATTTAACTTCAATTTCA
AAAAAAAAACTTTAAAAATTGATTAAAAATGGTGAAACCCAATTCAAAAGATACTGAATT
TTCACCTTCATCGTCATCGTCATCTTTGTATCGGGGAGTAAGGAAGAGGAAATGGGGGAA
ATGGGTATCGGAAATTAGATTACCTAATAGTAGAGAAAGAATTTGGTTGGGTTCTTATGA
TACGCCGGAAAAAGCTGCTAAAGCATTCGACGCCGCACTTTTTTGTTTGCGGGGTAAAGG
GGCTAATTTCAATTTCCCGGAAAATCCACCGGAGATTATGAACGGAAGGTCGATGACTCC
GTCGGAGATTCAATCGGCGGCGGCACAGTTTGCGAATAATACAGAACCCGAGCTTATCCG
GGTCGGACCGAGGGAGAATTCGGATCTTTCTTCTTCCTCATCGGAAATATTCCTGGCGGA
ATCGCCGTCGGTGTCAGTTTCCGATAGAGTAGAAAGTGAAAAGACGGAAATAACCTTGGG
TAATGATTTTATCAATATGTATCGGGTGGAGTCACCGGTTTCCGGGAGGGTAGAAAGTGA
AAAGACGGAAATGTCCTTGGATAATGGATTTATGGACATGTTTTCATCGTTGGGGACGGT
TAATGATATGTCCGATTTCGGAATTTTTCCGGGGTTCGATGATTTATCGGGTGAATTTTT
TATACCACCACCGTCACCACAACCATCGCAAATGCCTAATTTGGAATCATTAGAAGAAGA
GAATTATTTGAACTACGATGGATTTCAATCACAAGGGACTTCATTTCTTTGGAATTTTTG
AAGGATCTAAAAATTGTTACATTATATTCATTAATGGTTAATATTATAAGTATAAAAATT
AGAAATAGTACTTTATTTGTTGATTTTGTGGACACTTCTAGACATTTTTTTGGTTGCTAG
AATTGTTACAACATATGTGATTTTCTATACATAAGAGGATG
