Microarray Probes on PGSC0003DMT400007416
Probe ID | Chip | Probe Sequence |
---|
CUST_11034_PI426222305 |
JHI_St_60k_v1 |
CACAGAACAAGAATTTGTTACCAAAGGCCTAATATGGGAACTTTCATTACAGAATATCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007416
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007416 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G26690.1 |
+3 |
2e-91 |
275 |
124/191 (65%) |
emp24/gp25L/p24 family/GOLD family protein | chr1:9224299-9225682 REVERSE LENGTH=214 |
Transcript Sequence (1007 bp)
>PGSC0003DMT400007416 1007 pgsc_dm_v3.4
CCAAATCAAAACCTTATTGTTTTGCTATATTTTTCTTCAAAAGTCTTATCATTAAAAAAA
AAATGAAGATCCTCACAAGTAAATCACTGTTTATGTTTCTAATCTTGATGTTTTTTTCAA
TGAAAATACATTCACTGCAATTCGAAGTTTTATCTGGTCGCACAAAATGCATAGCTGAAG
ATATCAAGAGTCATTCCATGACTGTTGGCAAATATCATATTGTCAATCCCAATGAACCAC
ATCCTTTGCCAGATACTCACAAAGTCACCATCAGGGTGACATCTACGCATGGGAATACTT
TTCACTATGCGGATAATGTTCATGAGGGGCATTTTGCTTTTGAGACAACAGAAGCTGGGG
ATTATATGACTTGCTTCTATGCTGCTGATCACAAGCCCCCTGTTACTATGACTATTAATT
TCGACTGGAAGAGTGGTGTAGCTGCTAAGGACTGGACTAATGTTGCCAAGAAAGGCTCTG
TTGACCTTATGGAATTAGAACTGAAGAAGATGTATGAACATGTTAAAAACATCCATGATG
AGATGTTTTATCTACGTGAAAGGGAGGAAGAAATGCAAGAACTTAACAGATCAACCAACT
CCAAAATGGCTTGGATGACTGGACTGTCAATCTGTGTATGCTTATCTGTAGCAGGATTGC
AATTGTGGCATTTGAAAACCTTTTTCGAAAAGAAGAAGCTAATCTAATGTTATTCTGATA
TTTTCACTACTCTCCCGTTCCAGTAGAATTTTTTATAGACAACACAATAGTTAGAAGGGA
AGTTGTGTTTCATGTACAATGTGATAGAAAATTGTATTCTGAAATGCATGTGTTACTCTC
AGAGCTCTGTTTGCCTTCTCTCTGACTCTAATTTTCCACAAAACAAGACTCACAGAACAA
GAATTTGTTACCAAAGGCCTAATATGGGAACTTTCATTACAGAATATCAGTACTGATGTT
TCTTAAAGAATCAACAACTTGCAAGTGTTTGATGTAATAAAGAAGGG