Microarray Probes on PGSC0003DMT400007385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11054_PI426222305 |
JHI_St_60k_v1 |
AAATAAACGAGAGAGACTACTGGATTGTACACCGGACTGAAAGAAGTGTCGATGCTCTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G33290.1 |
+1 |
1e-143 |
424 |
208/275 (76%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:12074125-12075989 FORWARD LENGTH=379 |
Transcript Sequence (1696 bp)
>PGSC0003DMT400007385 1696 pgsc_dm_v3.4
ATATAGAGAAAATCCTACTTGACGAGGCTTCAATGTGGGCCCGAGATAGCGGGTGGGAAA
CCAAATATATAGTAATAATATGAAATGTGTATCATTTTCTCCAAGAACAATATAGTGGTA
AGGAATTGTTTTCAAAGTTTAGCTTGTTAGGCGAAATGAGGTCTAGTTTATTGATGTCTG
TAGTTACTAGTGTAATTACTCCAGCCATAAAAAGCAAATCTTGTTGTTTCATGAGTTTAT
CGCATTATCCACCATTAATGACTGCTAGCTACCGTTGTTTTCGTGCCCGGAGTAGCCTTT
CGTGCTGTAATACTCATGCTGACGATGATATGAGTGCCCTCTTTCAGATTCTGCCATGTG
ACTTACGGGACACCCTTTTGTGTGACCCCAGCCAAGATCAACTAGTAGAGGTGATTTTAG
ATTTAGGCTGTTTGCCACAAGCACATTACATAGATGATTCTGGGAGGCGTTACCTTCGAA
ATACTGAGGTAAACACTAAAGGTCTCTATGGAAGAAATACAATGTGTCCTCAAGGAAATT
GGACAATTTGGAGGAGATAATAGAGCTGGCATTGAGGGTACTTTGCATCGCATTTCCGCA
ATTAGGAATAGGAAGGGTGAAGTCATTGGTTTGACTTGCCGAGTTGGCAGGGCCAGAGGA
CAGATTGACATGGTGCGGGATTTGCTTGATTTTGGTGAAAGCATCTTGTTTGTTGGACGA
CCTGGTGTTGGTAAAACTACGGTTGTGCGAGAGATATCTCGTGTCTTGTCAGATGAACTT
CATAAAAGAGTGGTTATTGTTGACACAAGCAATGAAATAGGAGGTGATGGGGATATCCCA
CACTCAGCAATAGGAGGGGCAAGAAGATTGCAGGTTCCGGACCCATCGATGCAGCATCAG
GTTATGATTGAGGCAGTGGAGAACCACATGCCTGAGGTGATCATTATAGATGAGATTGGC
ACTGAATCTGAAGTTCATGCTTGTCGTACAATTGCTGAGAGAGGTGTTATGCTTATTGGT
ACAGCTCATGGCGAACAGCTAGAGAATATAATTAAGAATCCAACTCTGTCTGATCTGATT
GGAGGAGTAGTAACTGTGACTCTAAGTGATCAGGAGGCACGAATCAGGAACTGCAGTAAA
AGTGTTCTTGAGAGGAAAACTCCATCGCCCTTTCCTTTTTTGATTGAAATAAACGAGAGA
GACTACTGGATTGTACACCGGACTGAAAGAAGTGTCGATGCTCTGCTTCGGGGTAAAAAA
CCGCTAGTTGAGGTTAGGAGGAGAACTCAGCAATTACAGGTTGTGATTGAGAGATGGAGA
ACAAAAGCCTAAATACTATAAACTTCTGGTACTGCTCTACTGGTACAAGATCAAAACCAG
CTTGTTTTGAGGGCTTTGAGAACCAAAGATGTTTCGAAAACAGTGAAGTTGAAGGAGCTA
TTGACCTACTACACTAGCAGATACATACTGAGTATCCCAACACTAGCAGATACATACTGA
GTATCCCAGCAAAAGAAATTCTATAACAGACAACTTGACCATGTATAATATTATACGTTC
TTGTGAGTTCAATTGAATCTATTTGGTCTCGGCTTACATCTCTCTTTTTATGTTACAAAA
TACAAGTAACAGATTTTAGTACAAGTTTAGTTTCATTCTTTTGATTTCCAAACTGATAAA
AAGGGAGCAGTTAAAT
