Microarray Probes on PGSC0003DMT400006751
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9404_PI426222305 |
JHI_St_60k_v1 |
TAAAAGCTGATCATAATGGAGCTTTTAGGACTCAGAACTCTGGGCTTTGCTCTGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006751
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006751 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G11590.1 |
+2 |
8e-47 |
161 |
98/176 (56%) |
Integrase-type DNA-binding superfamily protein | chr5:3727789-3728499 REVERSE LENGTH=236 |
Transcript Sequence (1014 bp)
>PGSC0003DMT400006751 1014 pgsc_dm_v3.4
AAAAGGAAAAAAAAATATATTACTACAAAACACTCTATTCATTGCATTAACCGACTTGTA
TTAAGAGCTTCACGGGATAACTGTTTCTGTATATTCATTAATGGCGGAAGTTGAAGTACA
AATTTCAGAAACAGAGAGCTCTTCTAATACTAATACCTCTGTTTCTTCTTCTTCGTCTTC
GTTGTCCGCTGATTCCATGCACAAATCGGTTTTTGATTCGTCAAACAAATTACCGAAAGG
GAAGAAACGGCCGACGAAGAAACAGAAGGCTATTACTAATAGTGAGAGTAGACATCAAAT
TTACAGAGGAGTTAGGATGAGAAGTTGGGGGAAATGGGTATCTGAAATTCGTGAACCGAG
GAAGAAATCACGTATTTGGCTCGGTACTTATCCTACAGCAGAAATGGCCGCTAGGGCACA
TGATGTTGCAGCGGTGAGTATAAAAGGAAAATCCGCCATTCTCAATTTCCCTCATCTAAT
CGACTCGTTGCCTCGTCCATTGTCAAATTCACCTAGAGATGTTCAAGCTGCTGCTGCTAA
AGCAGCATCAATGAGGGACCCACCTTCTTCAGCCTCATCGTCCTCGTCCTCGTCCTCGTC
CTCATCCTCAACAACATCAACGGGATCTGAAGAGCTTTGTGAGATTATTGAACTGCCTAA
TTTAGCAGAAAGTGACGATTCAAAAACTGAGTTGCGGCCGAGTGACTCAGTTGAAGGACT
GCTGTACTCGCCGTGGTGGGCAGATCATAGTACAGATTTTTGTGGTTATTTTCTGGAGCA
GTCTGCAGCTGGCGCTGGGGAAAGTTTAATTTCTTGCAGCTTTGAGACACTGAAATGGGC
TTGTTAAAAGCTGATCATAATGGAGCTTTTAGGACTCAGAACTCTGGGCTTTGCTCTGTT
TTTTTTTTTTGTTTTTTATTATGGATTTTTTTGAATATCTGTCGAATAGTAGTTACTGTT
CTAGTAAATATACTTAAGTATCAGTTTAGTTGTGCATAATCATAAAATTTATTT
