Microarray Probes on PGSC0003DMT400006654
Probe ID | Chip | Probe Sequence |
---|
CUST_9382_PI426222305 |
JHI_St_60k_v1 |
GATACTGCAGTTATAACAAAAGAAGCACATTGAGACTGATTCTTGATTAGTCCATGTGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006654
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006654 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G13750.1 |
+3 |
0.0 |
1367 |
644/824 (78%) |
beta galactosidase 1 | chr3:4511192-4515756 FORWARD LENGTH=847 |
Transcript Sequence (3226 bp)
>PGSC0003DMT400006654 3226 pgsc_dm_v3.4
TCTTCATTTATTCACACTTATTACTCACTCTCATTTACTATAGCTAAAATTCATTATTTT
TTGCATTTTGAAAAAGAAGAAAAATAAAGTTTAAGGGGGGAAAAAAAATTTCATTTTGCC
TAAAAAAGGCACAATCTTGATAAAAAAGGAGATAATTTTACAACATGGGTTGTAAGCTTA
TACTAATGTTGAATGTGTTGTTTGTGTTGTTGGGTTCATGGGTTTTTTCTGGAACAGCTT
CTGTTTCATATGACCATAGGGCTATTATTGTAAATGGACAGAGAAGAATACTTATTTCTG
GTTCTGTTCATTACCCAAGAAGCACTCCTGAGATGTGGCCAGGTATTATTCAAAAGGCTA
AAGAAGGAGGTGTGGATGTGATTCAGACTTATGTTTTCTGGAATGGTCATGAGCCTCAAC
AAGGGAAATATTATTTTGAAGGGAGATATGATTTAGTGAAGTTTATTAAGCTGGTGCACC
AAGCAGGACTTTATGTCCATCTTAGAGTTGGACCTTATGCTTGTGCTGAATGGAATTTTG
GGGGTTTTCCTGTTTGGCTCAAATATGTTCCAGGTATCAGTTTCAGAACAAATAATGGAC
CTTTCAAGGCTGCAATGCAAAAATTCACTACCAAGATTGTCAATATGATGAAAGCGGAAC
GTTTGTATGAAACTCAAGGGGGGCCAATAATTCTATCTCAGATTGAGAATGAATATGGAC
CCATGGAATGGGAACTGGGAGCACCCGGTAAATCTTACGCACAGTGGGCAGCCAAAATGG
CTGTGGGTCTTGACACTGGTGTCCCATGGGTTATGTGCAAGCAAGACGATGCTCCTGATC
CTATTATAAATGCTTGCAATGGCTTCTACTGTGACTACTTTTCTCCAAACAAGGCTTATA
AACCAAAGATATGGACTGAAGCCTGGACTGCATGGTTTACTGGTTTTGGAAATCCAGTTC
CTTACCGTCCTGCTGAGGACTTGGCATTTGCTGTTGCAAAATTTATACAGAAGGGAGGTT
CCTTCATCAATTATTACATGTATCATGGAGGAACAAACTTTGGACGGACTGCTGGTGGTC
CATTTATTGCTACTAGTTATGACTATGATGCACCACTTGATGAATATGGATTATTGCGAC
AACCTAAATGGGGTCACCTGAAAGATCTGCATAGAGCAATAAAGCTTTGTGAACCAGCTT
TAGTCTCTGGAGATCCAGCTGTGACAGCACTTGGACACCAGCAGGAGGCCCATGTTTTTA
GGTCGAAGTCTGGCTCTTGTGCTGCATTCCTTGCAAACTATGACCAACACTCTTTTGCTA
CCGTGTCATTTGCAAACAGGCATTACAACTTGCCACCATGGTCAATCAGCATTCTTCCCG
ACTGCAAGAACACTGTATTTAATACAGCACGGATTGGTGCTCAAAGCGCTCAGATGAAGA
TGACTCCAGTCAGCAGAGGATTGCCCTGGCAGTCATTCAATGAAGAGACATCATCTTATG
AAGACAGTAGTTTTACAGTTGTTGGGCTATTGGAACAGATAAATACAACAAGAGATGTGT
CTGATTATTTGTGGTATTCAACCGATGTCAAGATTGATTCAAGAGAAGAGTTTTTGAGAG
GCGGAAAATGGCCTTGGCTTACGATCATGTCAGCTGGCCATGCATTGCATGTTTTTGTGA
ATGGTCAATTAGCAGGAACTGCATATGGAAGTTTAGAAAAACCAAAACTAAGTTTCAGTA
AAGCTGTAAATCTGAGAGCAGGTGTTAACAAGATTTCTCTGCTGAGCATTGCTGTTGGCC
TTCCGAATATTGGCCCACATTTTGAGACATGGAATGCTGGTGTTCTTGGTCCAGTTTCAC
TCAGTGGTCTTGACGAGGGGAAAAGAGATTTAACATGGCAGAAATGGTCTTACAAGGTTG
GTCTGAAAGGAGAGGCCTTGAGCCTTCATTCACTCAGTGGTAGCTCGTCCGTTGAATGGG
TCGAGGGCTCTTTGGTGGCTCAGAGACAGCCACTCACTTGGTACAAGAGCACTTTCAATG
CTCCAGCTGGAAATGATCCTTTGGCTTTAGACTTGAATACCATGGGCAAAGGACAAGTGT
GGATAAATGGTCAAAGCCTCGGACGCTACTGGCCTGGATATAAAGCATCTGGTAACTGCG
GTGCCTGTAACTATGCAGGCTGGTTTAATGAGAAAAAATGCCTTAGTAACTGTGGAGAGG
CTTCACAACGAATGTATCATGTTCCTCGTTCTTGGCTGTATCCTACTGGAAATTTGTTAG
TTCTATTTGAGGAATCGGGAGGAGAGCCTCATGGAATCTCTTTGGTAAAAAGAGAAGTTG
CAAGTGTTTGTGCAGATATAAACGAATGGCAACCACAGTTGATGAATTGGCAAATGCAAG
CATCTGGTAAAGTTGACAAACCACTGAGGCCTAAAGCTCACCTCTCGTGTGCTTCTGGTC
AGAAGATTACGTCAATCAAATTTGCAAGCTTTGGAACACCACAGGGGGTCTGCGGAAGCT
TCCGTGAAGGAAGCTGCCATGCCTTCCACTCATATGATGCTTTTGAAAGGTATTGCATTG
GGCAAAACTCGTGCTCAGTACCTGTAACACCAGAGATTTTTGGAGGTGATCCATGTCCAC
ATGTTATGAAGAAACTCTCAGTTGAGGTTATTTGCAGTTGATGACACTGAGGATAAACAA
ATAAAGTGGTTTCAGTTAGTTGTCTGAAGATATATATTTGAAGATCCATTACATATAAAA
AAGTTGGCTTTGATGGAGGTGAAGTTGTACAGATATGCAACACACCTTTCCATTTGAGGC
TCATATGAATTGCAATGGCCCAAGATTCTGTATATATTATGTTGGTTACTGTCAAGTTGG
TATTGGTTTGCAAATGTAAAACAATAGTATAGTCATTGGTTCAAGTGCGCATCGAGATTG
TGCTAGTGGGAGGTAGCAGGTTCTGGAGGAATAGTCGAGGTCTGCACAAGCTGGCCTAGA
TACTGCAGTTATAACAAAAGAAGCACATTGAGACTGATTCTTGATTAGTCCATGTGTAAA
TATTGTTACTGTTAGAATTTGCGAGTCTTATGGTTTCAGGATTTTCAGTATTTTAATACT
CTTTATCTTATGTAAAAATAGCAATATTTCATTGCTTTGTACCTGCAAAAATGCTGCTAC
TATGATGATGTGAAATAAACATCAAATTCTCTTCAACAGATGTTTT