Microarray Probes on PGSC0003DMT400006609
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9485_PI426222305 |
JHI_St_60k_v1 |
GCAGATCAAAGATCTTACTTATCCTGGACAAGTATATTGAGATTTCGAAGAAAGAGTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006609
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006609 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G72770.1 |
+3 |
4e-155 |
473 |
272/551 (49%) |
HYPERSENSITIVE TO ABA1 | chr1:27390998-27392851 FORWARD LENGTH=511 |
Transcript Sequence (3136 bp)
>PGSC0003DMT400006609 3136 pgsc_dm_v3.4
GGCTGACCTGCCAAGAAAGGACACGTGTTGTTCTTGAAAATGGTCCTCATGGAAAGTCCA
TGAACTCCCTTTTGTTTTTTTGTAATTAAGGGTAAGCGCAAAACAATTCAAAGCATTTCT
CTGTCTGCTAGCATTGATTGGAGTTAGATAATTGAATCTACACGTGTCTTCTAAGGAGTC
AGTGCATCAAAGGTAAAATCTTTTCTACATCCCAAGTTGTATTTTCTCTCTCATGTGTCT
CACAAAGAAAAAAAATAAAATCTTGAAAAGGGGCTGTAGAGGGAGAGTCTGCAAGGTGTT
TTGGTAAAAGGGTTTTTGTTGATCCTGCATCTTTGTTGCATGCTGAGTCAAATACCAGTT
GGAATGGAAATAGCAACGGTATGAAAGTTGGCGTTGGTAGGATTCCCTTGTTGACACTAG
GAGAAAGCTCTGGAAAATGTAGTCTGCCGCAGACTCTATTGGGAGCTGAAAACGGCCTGA
TTGTTAGCGATAGCATCATTCAGGGAAGTGATGAAGATGAGATTTTATCTGTTGGAGAGG
ATCCATGTGGAATTAATGGCGAGGAGTTGTTGCCACTGGGAACTAGCTTACAGTTGAGCT
TGCCAATTGCTGTTGAAATCGAGGGTATTAACAATGGACAAATAGTTGCCAAGGTCATAA
GTTTGGAAGAAAGGAGTTTTGATAGAAAGGTTAGTAATACCATAGTTGCTCTCCCAGATG
ATGAAATTACTAGTGGCCCTACACTAAAGGCATCTGTAGTGGCCCTTCCATTGCCCAGTG
AGAAGGAGCCTGTCAAAGAAAGTGTCAAGAGTGTGTTTGAATTGGAATGTGTGCCACTCT
GGGGTTCTGTATCTATCTGTGGAAAGAGACCGGAGATGGAGGATGCTCTTATGGCTGTTC
CTAATTTTATGAAAATTCCTATCAAGATGTTTATTGGTGATCGTGTTATTGATGGACTAA
GTCAAAGTTTGAGTCACCTGACATCTCATTTCTACGGAGTATATGATGGTCATGGAGGAT
CTCAGGTTGCAGATTATTGCTGTAAACGTGTTCATCTAGCATTAGTTGAGGAGTTAAAAC
TTCCCAAACATGATTTGGTGGATGGAAGTGTAAGGGATACCCGGCAGGTTCAGTGGGAGA
AGGTCTTTACTAATTGCTTTCTCAAGGTTGATGATGAAGTTGGAGGAAAGGTGAACATAG
ATCTCTGTGATGACAACATGAATACCTCTAGCTGCACCTCTGAGCCTATTGCCCCAGAAA
CTGTTGGGTCCACTGCGGTTGTAGCGGTGATTTGTTCATCTCATATTATAGTTGCTAACT
GTGGGGATTCAAGAGCAGTCCTTTATCGTGGCAAAGAAGCGGTGGCATTGTCAATCGATC
ACAAAGTAAAACACACTTTAGCATCAACCTCTTGTTCTCTTTTTTGTTCTTCTCTTCCTT
TTTTTCACATACATGTGTCTAATTTTGGCAGGAAAGAATGTGGTTGATGCATTACCATCT
CACTCTTTTACCTTGTATTCTTTTACCAGCCAAGCAGAGAAGATGAGTATGCCAGAATTG
AAGCATCTGGTGGTAAGGTCATTCAGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCAA
TGTCAAGATCTATTGGTGACAGATATTTGAAACCATGGATTATACCCGAACCAGAAGTTA
TGTTTGTACCACGTGCTAGAGAAGATGAATGCCTAGTTTTAGCCAGTGACGGATTGTGGG
ATGTGATGACAAACGAGGAAGCTTGTGAAGTGGCTAGACGACGAATTCTGCTGTGGCACA
AAAAGAATGGGACTAACTCTCTGCCGGAAAGGGGCCAGGGAGTGGATCCTGCTGCACAAG
CAGCGGCAGAGTATCTTTCATCGATGGCTCTTCAAAAAGGTAGCAAAGACAATATATCTG
TGATTGTGGTGGACCTTAAAGCTCACAGGAAATTCAAAAGCAAAAGTTAGAGATTACATG
TTCTCACCCACATTTGGTTTAGTATAAATCTGTACACGGCGACGGGTATAAATCTCATTA
TTACATAACTCAGTCCATTCATTTTTCCTATGGGCTTAAGGTGTGTATGAGAATAGTATT
TTAGCAATGTATTATAGAAAAAAACAGTTAACAAACGACGTTTATCCAAATTTTTTGGTG
TTTGTTGCGCCAGAAAATGGCTATGTAAATTGAGCATGTTGAAGCAATATCAGAGGTGCA
ATTTCTTAATTCTTCCGTTCAGTATAAAAGCAAAGACATTATTGGTTACTTGATAAGTTA
TGCACATTGCGGGTCTCATGAGGATCTATGAGGTTGAAGGGCAATTCGATTCATTAAGGG
GGCATAGTGCTGCTGTGGTTTCGGACTTAGCAAGGTCTAAGGGCCATTCGATTCATTAAG
GGGCGTAGTGGTGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGCTCT
CAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCT
AGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGG
TGATGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGT
TTCGGACCTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCAT
ACAAGTGGGTGATGAATTGAATTAGCTAATGAATCTTTCGTAATGCTTGCAAAGAAATCA
GAAGAAAGGCTTCTGCCCCTTGGTGTTTCGGAACGAATGGGAAGAAGGAATCAGAAATGA
ACTTATATAAGAGCGCTTATTCCGCTTCCTTCTACTCTTGAAAGGTGATGCCTAAATTGA
CAACGGATTAAACTCTGCTGAGGAATTCTTTTATTTGTCCTGGACAAGTACGTAGAAGCT
TGGGCTGCTTTAACCGTTTAGCCATGCAGATCAAAGATCTTACTTATCCTGGACAAGTAT
ATTGAGATTTCGAAGAAAGAGTAGAAAAAAACATAGCAAGGGAAGTGTGAGGAGGGAGAG
AGAATTTAACGTGTTAAAACAAACCATGTAACATAAATATGGAATCCAATTATCAATGGT
TAAATCATCACTTGTA
