Microarray Probes on PGSC0003DMT400006594
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9216_PI426222305 |
JHI_St_60k_v1 |
TCGGAAAGATTGTATGTTCAGAAACTCCTGAGGAAGATTGAGAGACAATATATATGAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006594
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006594 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52360.2 |
+1 |
8e-132 |
410 |
189/306 (62%) |
Coatomer, beta subunit | chr1:19499420-19505397 FORWARD LENGTH=970 |
Transcript Sequence (1594 bp)
>PGSC0003DMT400006594 1594 pgsc_dm_v3.4
GAAAAACATTTTTCCAATTCCATTTAGTGTTAAGCTTTTGTTAGTAAGGTTTTAAACTTT
TCAAACGTCCGAGACAATGGTAAGTAATAAGTCATTTTTACATCATCGTGATAATTATAT
ATGTTTATTAAGTAGCATATACAACATACGTATCTTATTTTCAGGATTACTTATTCGTAT
CTCAATGGGACTCATTTTGAATGTCATGACAATATAAAAAGTTCATTACACTAACGGTGT
ATATAACTTAAACTCTATTTTAATGGCTCGTTTGGTCAAATTTTTCAAGAAGCATTTGCA
TTCTCAATATATAACCTTCATAAAACTTGGTCATATAACATCTATATATTGCATCAGTAC
CTGTTGAATTGCAAATATTCAATTTGTATGATCTTATATATCTTGACGACTATTTTTTGT
TGATTGTTCCTTTTCCTTTGTCCTCCGTCTCTGTTGGATCAAATATCGCGGTGTCATCAG
ACTTTTGCAATTGAAATTGAGAAAAAACATGTCCAGAAATCAGAAAGGGTCAAGGCCTTG
GAGATCCACCCAACAGAGCCATGGATTTTAGTGAGCTTGTATACAGGAACTGTACAAATA
TGGAATTACCAATCTCAAACTGTAGAGAAGAACTATCAAGTCTCAGAGTCACCAGTCAGG
TCAGCCAAGTTTATTGCCCGTGAAAAAAGTATTGTTGTTGGATCAGATGATCACTTCATT
AGAGTATACAACTACACAACAGAGGAAAAGACTAAGGAATTCAAAGCACACGACGATTAT
ATCAGATCATTAGCTGTTCATCCTACTCTTCCTTATGTTCTGTCAAGTTCCGATGACATG
ATGATAAAGCTTTGGGACTGGGAAAAAGACTGGGCTTGTACTCAGATTTTTAAGGGGCAT
AACCACTATGTGATGCAAGTGGCCTTCAATCCAAAAGAAAACCAGACGTTTACAAGTGTA
TCACTTGACTGCACAATGAAGATGTGGAATCTTAGCTCCTCTGATCCAATTCTCGAACTA
GAAGCACATTCGAAGGGGATCAATTGTGTTGATTTCTTAACTTGTGATAATAAACAATAT
CTAATCACTGGATCAGATGATCACACAGCTAAGGTCTGGGACTTGCAAAATCAAACTTGT
GTCCAGATTCTTGAAGGTCATAAGAACAATATTTCTGCATTGGCAATGCATCCAGAACTT
CCTGCTCTTTTTACAGGGTCTGAGGATGGAACATTTAGCGTGTGGGATGCTACTAATTAC
AGCTTACTCAACACACAAATCTCTGAACTTGGGAGAATTTGGGCAATTGGATTTGCAAGC
CTGGAAGGTTCTCACATGCTCATAATTGGCTGTGATGAAGGAATGATTATCGGAAAGATT
GTATGTTCAGAAACTCCTGAGGAAGATTGAGAGACAATATATATGAAGAAGCTTATGTTT
TCTTTATGCTTTCTAGTTTCTGCCATTTTAATATGTTTTGATAATTACTTGTACTAGGAT
CTTGTGAATCCATTATGTCTATCTTGTACTTATTTTCTTGGAATTAAAGTTGATGTTGTA
TAAGAAGCCAAGAGTAAATAATTTCTCATAATTC
