Microarray Probes on PGSC0003DMT400006584
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9500_PI426222305 |
JHI_St_60k_v1 |
GCTGCCTGGAGATGTAAAAGAGTTTCTTTTGAGTGTCATAAGTTTGTGTTGATTGTACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006584
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006584 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80440.1 |
+2 |
1e-111 |
335 |
175/362 (48%) |
Galactose oxidase/kelch repeat superfamily protein | chr1:30241763-30242827 FORWARD LENGTH=354 |
Transcript Sequence (1274 bp)
>PGSC0003DMT400006584 1274 pgsc_dm_v3.4
CAAGATTTCTTATTTCTCTTTCTCTTCTTCTTCACATATAAAAATCCACTACCTTATCCT
TCTTTTCTCTGCGCCTTTCATGGAGATTATTCCCACTCTTCCTTACGATATCGGACTCGA
ATGTCTTATTCGAGTTCCTTATTATAATTTCTCATCGGTTACTTCCGTCAGTAGAAACTG
GAAGCTTCAGATTGAGCTTCCCGAGTTTTGGAGGCGAAGAAGAGCTACTGGTTCCACCCG
TCAGGTAATTTTAATGGCGCAAGCCCGAATTGACCCGAGATTGAAACTCGGGTCATTCAA
GTACTCTGCTTTTTCGGTTTACAAGCTTACGCTTTACGAACCGGAATCGGGTTATTGGGC
GGAACTACCACCGGTTCCTGGTATTTCCGATGGATTGCCGATGTTTTGTCAGCTCGTCGG
AGTTGGATTGAATCTGGTGGTGATGGGCGGGTGGAACCCTCTTACTTGGGAACCTTCAAA
CGCTGTTTTTGTTTTTAGCTTTGTGTCCGCCACGTGGCGACGTGGAGCCGACATGCCTGG
TTGCCGGAGATCGTTTTTCGGTTGTGCGTCGGATTCTGAACGGACGGTGTACGTCGCCGG
AGGTCACGACGAGGAGAAAAACGCACTTAAATCGGCGATGGCGTATGACGTGGCAAGGGA
TATGTGGGTCCCAATGCCTGACATGGCAAGTGAAAGAGATGAATGTAAATGCACTTTTTT
TCAAGATAAATTCCACGTCATCGGCGGATATGACACGAGCATGCAAGGCCAGTTCGGTAC
AAGCGCTGAGTCATTCGATCCTTCCACGTGGCAGTGGGACCAAGTCAACGAACATTTCTT
TGAATCTGCCACGTGTCCAAGAACCTGCGTTGAGGGTGGGGACGGAAAATTGTACTTGTG
CCGGGACGGTGATGTGCTGGCACTCGGAAAGTCTACGTGGCAAGCTGTGGCGGCGATTCC
GGTGGAGCTCCGGAGCGTAGCTTTTGTGACAGCATGGAGGGGTAAAATTCTGATGACTGG
TTCTATGGGATTTAATGAACCCCACAATACTTATGTTCTTGATTTACAGAGTTATAAATG
GACCAAAATGGATACTCCGGCGAACTTTTCCGGCCACGTTCAATCCGGCTGCTGCCTGGA
GATGTAAAAGAGTTTCTTTTGAGTGTCATAAGTTTGTGTTGATTGTACAGTTATAATTAT
CAGAATAGTTTTGTTGCGTTGATAAAACATACATGCGTATAAATAAAAAAACATCAACTA
AAATTTCGACAAAT
