Microarray Probes on PGSC0003DMT400006444
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9364_PI426222305 |
JHI_St_60k_v1 |
CCTCTTTCAATGCTGAATTGATGTGATGTTGGCTTTTCTTTTCCCAATCTACTCCCTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006444
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006444 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G25910.2 |
+1 |
1e-150 |
443 |
219/341 (64%) |
3-5 exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | chr2:11049379-11051997 REVERSE LENGTH=342 |
Transcript Sequence (1949 bp)
>PGSC0003DMT400006444 1949 pgsc_dm_v3.4
AAACTATTTGAGAATTGACATCATGTAACTTCCAATTTTCCAGTATCAACATAGGTAAAT
GTACGAAACACAGTATAGCATGCATACCCCGCGGCCCCGCCTAAGCAGAAAGAGAGAAAA
GTAGGGCTAAAAGCACTATTCTGCAGGCATTTAGGGTGCTTCGTTTGTGTTGTATCCATT
GAACATTAGCAGTAGTTATGGATATTGAATGTGTAAGGTCCAATGTTAAAAACTGATTGT
TTTGTTGGTGTTCATTTCAAATTTTTCAATCATATGGCTTTAGCATCTAGTCCTCATCAA
ACTTACATTCCTCTCCCATCTTCCAATTCAGGTGGTAGGCATGCTGATCATGAAGTAGTT
TTAAAACCAGTCCCCATTTATATCATCAGCCATGAATCTCAACTTCCAGCCACATTTCTC
AACCCTTCTCCAAAAAATGAGATGGTTGTTGGACTTGACTGCGAGGGTGTTGACCTCTGT
AGATATGGAACTCTCTGTATTGTGCAGCTTGCTTTTCCGGACGCTATCTACTTGGTTGAT
GCAGTACGCGGTGGGAGAAAGTTGATTAACGCTTGTAAGCCTGCTCTTGAGTCTGTTTAT
GTCACAAAAGTTATTCACGACTGCAAACGGGATAGTGAGGCATTATACTATCAGTTTGGT
ATCATGTTGCACAATGTTATGGATACCCAGATAGCTTATTATCTGATAGAGGAACAGTTG
GGGAAGAAGAGCACACAAGATGGCCATATCTCTTTTGTGCGCCTTCTTGCAGATCCACGC
TATTGTGGCATATCATACGTGGAGAAAAAAGAAGTCCGTTCCCTTCTGAAAGAGGATCCT
CAGTTTTGGACCTACCGACCATTATCTGAGCTAATGGTCCGTGCAGCTGCTGATGATGTT
CGATTTCTTCCATACGTATTCCATAAGATGATGGAGAAATTGAGTGAAGAATCATTGTGG
AGACTTGCAGTTCGTGGTTCACTTTGTTGTCGGTGTTTCTGCATAAGTGACAACGAATAT
GCTGATTGGCCAGCAATCCCTTCTATTCCAGAGTTCCTCAATGTGGAAAGAGATACTTTA
GAAGACGAGATCTTGTCCATACTTGATGTGCCACCCGGGAAAATGGGATGTGTTATTGGT
AGAAAAGGATCCTCAATTTTGTCAATCAAGGAATCATGCAAGGCAGAAATCCTAATCAGT
GGATCGAAGGGAGCGCCAGACAAGGTAAGGAAAGCAGAAGCCATGTTGAGGGGCCGGATG
TTGTGACTTGTGAGACAACCCTTTTGCTGCACCTGGAAGCCAAAGCTTTGCATTCGTATT
ACCCGATCATCACACTAAACAAATCTCAAGGGAAACCTATCTCACGTCTTTTTGCTAATA
TACAAACCCTGATCTCCCAAATGCCAATTCATTTCACATTCGACAGGGTTCTAAATCAAT
GCATCTATCGTTGAAATTAAATTCGTACTTGTTTTACACGCCAATTTGAATGTATTTTAG
CGCCTAATACTTCTCTTACGTGGATGGGGTAGACATTGTTCCTTAGGTCAGTTGTGAACT
TGATTGGTGGAGTGGTCTTGGGGGGTCATTGTCATGCCCACGGAGTGGCCAGCTTGGGAA
TTTTGAGAATGATACTGGATAGGAGTGGACTATAAAAATCTAGTTGTAATTGTTGTAGTG
GGAGCCATGGGGGAATAGTTCTAGAAAATGTGGAGAAAGTGACAAAGGGATAAAAGCTAG
CCCCCCCTTCTTCACAGTTCACATGACCACACGGTGACTTTGGGGGATTGCGGACAAAAG
AGGTCGTTGGTGGGCTTAAGGCCATTGAATTTGAAACAGCGTCACTGTACAATGCATGTA
CAGCAAATGTTTCTTCACATACAAAGAAACCTCTTTCAATGCTGAATTGATGTGATGTTG
GCTTTTCTTTTCCCAATCTACTCCCTCCG
