Microarray Probes on PGSC0003DMT400006302
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17859_PI426222305 |
JHI_St_60k_v1 |
GGAGCAGAGTCCTCCCTAGTACTTTTCGTTATGCTTTTGTTTGTATTTTGTTCCTTTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006302
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006302 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G61820.1 |
+2 |
3e-128 |
229 |
113/263 (43%) |
beta glucosidase 46 | chr1:22835452-22838444 FORWARD LENGTH=516 |
Transcript Sequence (1789 bp)
>PGSC0003DMT400006302 1789 pgsc_dm_v3.4
ATTTCTTGAAGATGGAAAAGGGTTGAGTAATTGGGATGTTTTTAGTCATACTAAAGGAAG
GATAAATAATGGAGATACTGGAGATATAGCGGATGATCATTACCATCGATTTCAGGTCGA
ATATCTGGATTTTGACTAGTTCTCTTAAAAGAAATTAACTTTACTTTCTAATTCTATGAA
GTATTGCAGGAAGATGTTGAGTTAATGCACTCTATTGGCTTGAATTCGTATCGTTTCTCT
ATATCGTGGAGCAGAGTCCTCCCTAGTACTTTTCGTTATGCTTTTGTTTGTATTTTGTTC
CTTTGATTGCTGAGTTAATCGGATTACTTATTATGTTTACGTTTTACAAGTCTTGGTTGT
CTTGAATTGTGATAGGAGGAAGGTTTGGTAAAGTAAATTTTGCTGGTGTTACGTTCTACA
ACGAACTCATCGATTCTCTCTTACTCAAAGGAATAACACCATTTGTGACTCTTAATCACC
ACGACCATCCACATGAACTCGAGGAAAAATATGGGGGCTGGCTTAATCCTATCATGCAGG
AAGAATTTTCGTATTTTGCTCAGATTTGTTTCTCGAGTTTTGGTGATAGAGTGAAGTATT
GGACCACAATCAATGAGCCAAACATGTTTGCAGAAATGGCCTATGTGAGGGGAGTGTACC
CTCCTGCTCGTTGCTCCCCGCCTTTTGGCAACTGTTCAGCTGGAAATTCTGATGCCGAAC
CTCTTGTTGCAATGCATAACATGTTATTGGCACATGCCAAGGCTGCAAAACTATATCGCG
AGCATTTTCAGGTAAGGATCTGCTTTCACATATCTTCTCAAATAGTGTAACATGAGCTTA
CCCGAATTTGATGCAGCCTAAACATGGGGGATTGATAGGAATTGTTGTGCATTCATTTAT
GTATAAACCGTTAAGGAATAATGACTTTGATCGTGATGCTGCTAATAGGGCTGTGCTATT
TACCGCTGCTTGGGTTTTCGATCCTTTAGTACACGGAGATTACCCTCCAGAAATGCGTAA
ATATCTTCTAGATGCACTACCGAGGTTCACCTCAGATGAACGAAAGCTTATTAAAGATAG
TATTGATTTCATGGGAATAAACCACTATGGCACTCTGTATGCAAAAGATTGCATTTATTC
TAGCTGTGTTTGCTCCAATTCTAGTTGCATTGCGGGTGGAGACCACCCTATCCATGGCTA
TCTCATTACTCTAGCAGAGAAAGATGGCGTTTCTATTGGAGAACCGACAGGAATGTCTCG
ATTTTTTGTCGTTCCTAATGGAATGGAGGAGATTGTGGACTATATGAAGAAGAGATATCA
TAACAAACCTATGTTTGTCACTGAAAATGGCTACGCTTCTCTGAATCCTACTACTGCACA
AGCGGATGAGCTACAAAATGATACTAAGCGAGTTGAATTCCATAAATCATATCTTGCATC
ATTGGCTCGAGCGATCAGGAAGGGTGCTGATGTACGTGGTTATTTCATTTGGAGCCTGAT
GGATAATTTCGAGTGGACTAGTGGATACGAGCTGAAATTTGGGTTATACTATGTTGATCG
CGCTACTTTAGATCGAGTTCCCAAGCTTTCAGCAAAATGGTATACAGATTTCTTGACTAA
CAACAGCCTCAATGGTGAAGAAACAGGAAAGTTAATTACATTTAAGTATAGTTCACAAGC
AAATTATTTATCAGACAAATAGTCCTCCAACAAGTACTATTAACTATATTGCTCGAACTC
GTAAAAAATAACTATATTTATTATTTTAAAAGTTAAGGATAATAGTAAT
