Microarray Probes on PGSC0003DMT400005273
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18601_PI426222305 |
JHI_St_60k_v1 |
GAACAATCTCCAGGGATTCTCTCATACTCCTGGTTTTCCTCTAGTTTCATTATATGTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005273
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005273 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G04900.1 |
+3 |
6e-24 |
97 |
62/121 (51%) |
ROP-interactive CRIB motif-containing protein 10 | chr4:2486218-2487779 REVERSE LENGTH=156 |
Transcript Sequence (1088 bp)
>PGSC0003DMT400005273 1088 pgsc_dm_v3.4
GAGAAGGGTAATTGAAGGTCAATTTTTTATAGTATTGTGTTTGCATTTTTTGGTTTAGGC
AAAGGAATTGGTTCTTCACATTTAAGTGCTGCTGCTGCTGCTGCTTCTATCTGTATTCTG
TTTCATCTCTGAGCAGAGGGTGTTTGTTGTATTGGGGTTTTACATACTCTTCTATGGGAA
CCAAAATGAAGGGGATCTACAAATACATTTCTAATATTTTTGTTGTGAAGGAGAGGGAGA
TAGAAATTGGATTTCCAACTGATGTTAAGCATGTGGCACATATTGGTTGGGATGGACAAT
CAGGCAATGCACCTAGTTGGATGAATGAATTCAAGACTGGGCCTGATTTTGCAGCAACTT
CTATTGGTAATTCTGGTTCTGCACATTCTCCATGGGCATCACAAGATTACACAGAGTCAT
TGAGACAGCAACAATCATCTGATCTTTACAGGGACGTAACACCTACAGTGGGTCCTAAGA
AACAAAAGCGGAGGAAGGCCAAGTCGACATCCTCTCCTAGGTCTGGTTCATCATCCTCGT
CAAGGTCATCACGAGCAGAAAAATCCAAGACTAAATTTGTCGAAGGCAATGCTAAACCAC
TAAACATAGAGGTGGCTTAATGGTACAAACTTGTAGCTTAAACTGCTGAGAATTCTGTCA
TTGCCTAGCTATCAAAGTTGTTCATAGTCCTCATGGAAGGATCCACGAGAAAGATGAGGA
GGGTATAGAAACTTGAGTAGATGTAGAGAGTGTTACACTACAAATGTTATAAAGTAATAT
GGAAGAAACCTAAAGAAGTAGTAGGAGGGCTTAGAGATGTGAAAACACAAGGTGAAAAAC
TTGAAAACTTCCAAAACCAGGACAATGTTTTGGGAGAATTATAAATTCTTTTCCTTTATT
TCTTCTATTTATTTTTCTCTTAGTTTTATCGTTCCTCTTCTTGTAACTACAACGAGGAAG
GATCGTGTAAAGAGTTGAATCGTTTAGTCTATTGGTTGAAGATTGTACTAATGCTAATTA
TTTGATTTGAACAATCTCCAGGGATTCTCTCATACTCCTGGTTTTCCTCTAGTTTCATTA
TATGTAGA
