Microarray Probes on PGSC0003DMT400005250
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18453_PI426222305 |
JHI_St_60k_v1 |
GGTCTCCCTAGGTTTCTTGTCTCAACTCACTAAACTCATATAAAATTTTGTAGCAGTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005250
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005250 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G21200.1 |
+1 |
5e-146 |
425 |
211/337 (63%) |
gibberellin 2-oxidase 8 | chr4:11302751-11306601 FORWARD LENGTH=338 |
Transcript Sequence (1449 bp)
>PGSC0003DMT400005250 1449 pgsc_dm_v3.4
AAAAAAACATATTTAGCGACAATTGAGATATTGACGTCTATTCATTGATGATAAAAATCA
TTTTTGATGTAATGCTAGTTACTTCCCTTCTTCTCTTTCCCCCTAATTAATCACTAATAT
TTATATGCTTGTTTTGAATTTTTCATATTTTGTTACACAGGACATTAAATATACTAGGGA
AAAATTATGGTGAAGTCTACAAACTTCTCACAGCAGGCAAACCAAAAAATAATTAGGAGG
GAAGAAGAATCAGCTGATCCTCCTTTTGAAGAGACATATAAGAAACTTTTCGATGAGATA
AGAATTGGAAAGGCTACTTCAAAAATGAGAAACTACGAAAACCTGTTTGTGGTGGAAGAA
TGTGAATTGCCATTAATAGATCTTGAGCTACTAAAGGGAAGAGAATTTGAGAGAGAAGAA
TGCAAGAGAAAGATAGCACAGGCTTCACAAGAATGGGGTTTTTTCCAAGTAGTAAACCAT
GGAATATCACAGGATGTATTATTGAAAATGAGGAAGGAACAAATGAAGCTTTTCAAAAAG
CCATTTCATGAGAAAATGAATGACAAACAACTTAATTTCTCTGCAGGGAGTTACCGCTGG
GGAACTCCTTCAGCTACTTGTCTTCAACAACTTTCTTGGTCTGAAGCTTTTCATGTACCT
CTCACTGATATCTCCAATTCAATTCATCATCCTACAACCCTCAGCTCCACAATGGAACAG
TTTGCAACAACAGTGTCTGAATTAGCACATAATTTAGCAAGAATTTTGTCAGAAAGAATG
GGATATAAGTCGAAATATTTCAGAGAAACATGTTTGCCACACACTTGTTACGTTCGAATG
AATCGATATCCAGCATGCCCTATTTCTCCACAAGTGTTTGGATTAATGCCACACACTGAT
AGTGATTTCCTCACAATATTGCATCAAGATGAGATTGGAGGGTTGCAATTAGTAAGAGAT
GGGAAATGGATTTCTGTTAAGCCTAATCCTGAAGCACTAATTATCAACATTGGAGATTTG
TTTCAGGCTTGGAGCAATGGTGTTTATAAAAGTGTTGAGCACAGGGTTGTTACAAATAAA
GCAAAAGAGAGATTCTCCACTGCATTTTTCTTATGCCCATCCTATGATACAGAAATAAGA
AGTTGTTTTGAGCCTTCTGTTTATAAAAGATTTACCTTTAGAGAATTCAGACAACAAGTC
CAAGAAGATGTTAAGAAATATGGTTATAAAGTAGGTCTCCCTAGGTTTCTTGTCTCAACT
CACTAAACTCATATAAAATTTTGTAGCAGTTAAAAATGCATATAATAATATATATATGGT
CATGATATTTGACGACCTTTTAAATAGCAAAAAAAGTATAAGTCAATCTTTCTGATTTTT
GAGTTTTAATTTAGAACTCAAAAATTAAGTAGTGTAACGTGTACGTCCATATCTTATATA
TATAACTTC
