Microarray Probes on PGSC0003DMT400004870
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43662_PI426222305 |
JHI_St_60k_v1 |
GCGACATCTTATACTACACTCCTTTTTCCCATCGTCTTCCAGTAGCTATTGGTTTTTACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004870
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004870 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G03810.1 |
+1 |
5e-23 |
71 |
83/356 (23%) |
18S pre-ribosomal assembly protein gar2-related | chr2:1162703-1164286 FORWARD LENGTH=439 |
Transcript Sequence (2111 bp)
>PGSC0003DMT400004870 2111 pgsc_dm_v3.4
CTAAACCACACCCAAATTTATTTATACTTACTATAAATATATGATAAAGACTATTTTCTG
GATCTAAGTCAGAATTTGATTTATGCAAACGACACGCCGGAATAGGACGGAGGGCGGTGG
TGATCTGTTTACAACAGAGCGGAAGGCGGCGGTACTCTGTTTTCCGTGACTTAACACACT
AAATAGAAGGCTATGATGACGGAAAATCCGGATGAAATGTTAACTCACTCAAATGGTTGC
AAGGACTCTAAGTCTTTAGTCTTGCCAACGAAAGATCTACTTGATTCAAATGGTCGTGAT
GGCACTAAAGACTCTTTGGCATGTGAAAAGGAGAGGAACGAATTCTGGAATGTTCAGGAA
CTTGATGACTCTGAATTTTTTGAAGATATTTCAAGAAGTAACAAACATGAAATTAGAGCT
TCACCTCTGAAAGATGATCCGATCGAAGCCCTGTCTAATTTAACTTCTTGCAAGAGAAAT
GGAAATCCTTTTGCATGTGATACAGCAGATAGAGATCACCCCTGGAGTATTCCCAAATTT
GAGGACCCTATGATTGTGAATTTCTTCGACGATAAAGAAAAGGAAACCGTGGTCTCTAGT
GCACAATTTACCTCTCTTTCAGAGTTGTTTGGTACAAACACTCATTTATACACCGATAAG
GGTGTCCTGGAATTCAAATTGCCTGAATTGACAATTTGCTACAATGAGAATAACTATAAC
ATTATGAAAGACATATGCATGGATGAGGGTGTACCTCTCATGGATAAAATTGTGACTGAA
AGCAGGAAATATCATCAACCTGACTCGTCTATTTCTCTAGCTGTTGACGAACATCAGCCT
AGAAACACAAGGGAAGGTGTTGACAGTGAATTGGTCTCATCCGGTGAGTCCAAAGATTCA
TCAGTCGAAAATGCCGTCAAAATTTCTGTTGATCATCATACAACTAAAGAAGATGAGGAT
ACTAAATCACTTGGTCCAAATGGTATAAACCCCTTCTTGGAAGATAATATGAGCAAATAT
GCTGACAAGGATTCTTCTCTGGATGTGATGAAGATTTTTGGATCAAAAGATACTACAACG
GCAAAAGCTACGAACATATCAGAAAACGAATCCGACATTCAGAATTTAAAGGAATCGAAC
TCTGATGCTGAACAATCAGCACTGCAGGCAAATCAGATACCTACTTTTGTAGCAGCTTTC
AACAGCCAAAACACAGTCTCGGCAGCTGATGGAACAAACAACAATGGACCAGGTAGCAAC
TTCTCTAACAATAGCAAGTCGGAATCTGGAGCTATTACTTGCGACTTCAACTTGACTGAG
CTGGCTTTAAGTAGCAGCGTGGCGAAAAGTGACAAACACTTGCCTGAACAATCCCATAAA
TTAGAGGCTGTCTCCAGTCAAAAGGATGGGAGTTCTGACAGCTTTTCAGCAGCTACTCAA
GTTCATTTTGCCAATAGTGTAGACTCCTGCAATAGCAGTATTCACGCCGACCCCCCAAAT
GTGGCTAATCTTGAGGAGAAGAACTCTGGTAGTATCCCCCTTGGTGTGCATGGTCATTTT
GCAAATGGAGAGGCAAGTTTTGGACCTGCATCTGGTTTGATTTCTTACTCAGGGCATATA
ACACATTCGGGTAACATATCTCTTCGGTCAGATAGCAGCACAACCAGTGCCAGATCCTTC
GCCTTCCCAGTGTAATTGTTTGCGACATCTTATACTACACTCCTTTTTCCCATCGTCTTC
CAGTAGCTATTGGTTTTTACTAACATTTTCCTTGTGTTTATCATATCTTAACAGCTTACA
ATCTGAATGGAACAGTAGTCCAGTAAGAATGGCGAAGGCAGAACGGAGACATTATAAGGG
TTGGAGACAAAGCCTTCTCTGTTGTAAATTCTAAGTCCTTTTTGTTTCTTTTTGTAGAGT
TTTCAGTTACATCATTTCATCATCCTTTGTTAGTTACATGTTGATATTCTTAGGAATGAA
TGACATGTTATTGGTGATAGGTTTAGAGGGCTCTTTGAGTTTGTTATGGATCTTAAAAAG
TGGAGGCAGTGAAATGTAGACTCAATTAACCCCTTGTTTTCCTTATATTATGTTCTATCC
TTCAATATAAT
