Microarray Probes on PGSC0003DMT400004867
Probe ID | Chip | Probe Sequence |
---|
CUST_43675_PI426222305 |
JHI_St_60k_v1 |
ATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGATTTGGGCTTGAAATTATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004867
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004867 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G14620.1 |
+3 |
0.0 |
549 |
302/554 (55%) |
domains rearranged methyltransferase 2 | chr5:4715429-4718578 REVERSE LENGTH=626 |
Transcript Sequence (2472 bp)
>PGSC0003DMT400004867 2472 pgsc_dm_v3.4
GTCCTTACATGTTTGGTTATCCTCATAAGTCCTCTCTTTCTTCTTTCGCTTAATTTGTGA
AAAAAACTGATTTTTTCATCACTTTCTACACTTTACTCTGAAAAAAATGCATATAGTAGC
GATATAATTCGTCTATTAGGTAGTTAAATATATCTCGACAACTAAATTTTGGGTGATGAT
TTATTCTTGTCGCTGAAGAGTTCGGAGTTCTTTTTGAGGAATTACCTTTAAAAATGGATA
ACAACTTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAATTAGAAA
TACAAGAAATACCGGACGCAACATTTTCCTCGTGCACAAATTTAAGAAATGTTGGACATC
ATACTGTTAGTGGTCATGGGGAGGCAAGCTCATCATCAGTACCCTGTCAATCCAAGTTCA
TTCAACAATTTATTGTGATGGGATTTCCTGAAGAATCTATTGCAAAAGCGATAGAGCAAA
ATGGAGAAAATGAAGGTTTGGTGCTAGATGCTCTTTTGACATTCAAGGCACTTGAAGATT
CTCCTGAAGAACAGCCTAGTACGAGTGCACAGATGGAACCCAGCATTAGTTCTGATGATA
GCTCTTCTCAATGCAACGAGAACGTTTTGGATGATGTTTATGAAGATGATAGTTGGTCCT
CGGACTCGGACAATTGTATGAATTCTGCTAAACAGACTTACTTGAATGACGACAACAGTT
CTTTGTCTGAAAACGAGAATTCATTATTATTCCTAGCAAATATGGGATACCCCGCGGAGG
AGGCTTCCATAGCGATGGAGAGATGTGGTCCAGAAGCATCGTTTTCGGAGTTGATAGATT
TCATGTGTGCTGCTCAAATGGCAAGAGAAGAAGACGTCTATCTGCCCGAAGATGAAAAGC
CAAAACTAAATAGTGGTGGATACAAGAGGAAGATGTATAATGAACTTCCCGTAAGGAAAA
AGCAAAGGGCGATTACAGATGAAGAGCCAATTCATTTGCCCAGACCTATGATCGGATTCG
GGGTTCCTACGGAATCCTTACCAGCTATAGTGCAAAGAACTCTGCCAGAGCAAGCTATTG
GCCCCCCTTTTTTCTATTATGAAAATGTTGCTCTTGCTCCAAAGGGTGTGTGGGACACCA
TGTCAAGATTCCTTTACGATGTTGAGCCCGAGTTTGTTGACTCGAAATATTTTTGCGCTA
CCGCAAGGAAAAGGGGATATATTCATAATCTACCAATTGAAGATAGATTTCCTTTACTTC
CACTTCCTCCACGTACCATTCATGAGGCGTTTCCTCTAACGAAGAAATGGTGGCCATCTT
GGGATACACGAACAAAGTTAAATTGTTTGCAAACATCTATTGGGAGTGCAAGGTTAGCTG
ATAGAATCAGGAAAGCTATGAAAGCGATGGAGAACTTCGATGGTGAGCCACCGTTGATGG
TGCAAAAGTATGTTCTAGATGAATGTCGGAAGTGGAATTTGCTGTGGGTTGGTAGAAACA
AAGCTTCTCCTCTGGAGACTGATGAATTTGAAATGCTAATGGGATTTCCACGGAATCATA
CCCGTGGAGGCGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACGCGTTCCAGG
TCGACACAGTGGCATACCATTTATCGGTGTTGAAAGACTTGTATCCAAATGGTATCAATG
TTTTATCACTATTTTCTGGAATTGGTGGTGCTGAAGTTGCTCTATATCGTCTCGGTATTC
CATTGAACAATGTGGTTTCCGTAGAGATATCTGAAGTGAACAGGAATATTCTGAGAAGCT
GGTGGGAGCAAACAAATCAAAAGGGGAATCTTATAGATTTCAATGATATACAGCAGCTGA
ACGGAGACGTCTTGGAGCAAATGATCGATTCATTTGGAGGATTCGATTTAGTAATTGGAG
GAAGCCCGTGCAACAACCTTACTGGAAGTAACAGAGTGACTCGAGATGGACTCGAAGGTA
AAGATTCTTCTCTATTTTATGACTATGTTCGGATAGTGGACTTGGTCAAATCCATAATGT
CTAATCGTAGAGTGTGACGAAAATATGTTTGAGTTTCTGAAGGGGATGGACTTGGAAGGC
AACGAGTAAAATGTTGTCTTTGATTTTGATTTTGGTTTGTACATATTTTTCGATGCAGTA
TGTTCGTTCGTGGAAAAATGAACTGTTGAACTTCTCATTGTAAATGACATCAAATGACGT
TGAAAATGGGTAGTCTTGAACTTTGTGATTCGTGCTGAGCTCATGAGCAAACGCCAAAAG
TGTTGTCCATGGAGCGAAAACTTATTAAATTTGAATTTTGTTCATGGGGTAAAAAGTTCA
AAACCATCTATTTTGAATGTCATTCCTCTAAATCACTCAAATTAGTCCGTGAAATTATAA
TTCGTCCAATCCATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGATTTGGG
CTTGAAATTATC