Microarray Probes on PGSC0003DMT400004865
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43685_PI426222305 |
JHI_St_60k_v1 |
ATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGATTTGGGCTTGAAATTATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004865
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004865 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G14620.1 |
+2 |
2e-175 |
530 |
266/429 (62%) |
domains rearranged methyltransferase 2 | chr5:4715429-4718578 REVERSE LENGTH=626 |
Transcript Sequence (3017 bp)
>PGSC0003DMT400004865 3017 pgsc_dm_v3.4
GTCCTTACATGTTTGGTTATCCTCATAAGTCCTCTCTTTCTTCTTTCGCTTAATTTGTGA
AAAAAACTGATTTTTTCATCACTTTCTACACTTTACTCTGAAAAAAATGCATATAGTAGC
GATATAATTCGTCTATTAGGTAGTTAAATATATCTCGACAACTAAATTTTGGGTGATGAT
TTATTCTTGTCGCTGAAGAGTTCGGAGTTCTTTTTGAGGAATTACCTTTAAAAATGGATA
ACAACTTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAATTAGAAA
TACAAGAAATACCGGACGCAACATTTTCCTCGTGCACAAATTTAAGAAATGTTGGACATC
ATACTGTTAGTGGTCATGGGGAGGTATATGCTTTAATCCTTGTATTCGATATCTAGTGAT
ATTTGTTGTCGAGGAACATTGCATCTCAATTTATGGCCTCTTTTGGTCTTCTCGTACGTG
AAGGCAAGCTCATCATCAGTACCCTGTCAATCCAAGTTCATTCAACAATTTATTGTGATG
GGATTTCCTGAAGAATCTATTGCAAAAGCGATAGAGCAAAATGGTATTTCAATTGCCCGA
GTCTTTATACAACTAAAAAAATGATTTTTCAATTGTCGTATTGATGTTGTTGGACTTGAG
ACACAGGAGAAAATGAAGGTTTGGTGCTAGATGCTCTTTTGACATTCAAGGTGTGTAAAA
TCTGCCTCATTGTTTGCCAACCACCTTTTTCTCTACTTATAGCTGCCTATACGTTCCGCC
ACTTGCATAAGGTTTTCTTAGATCAGTCAGCGGTTTAAATGGACGGCTATTAACCGATGA
CGATATTCTGTCATTTGAACGTTTCCCTAGGTGGTGACTGTGCAATGTATGATGCCAATT
GTGTTAGAATATACTGAACTTTTATCTGTCTTCATTGTAATGATGACTTTCTTCTATCGT
TTCATTTTTCACTAGAATAGAAGAGGAAACAAAAATAGAAAAATTATGATCTTTATTTGC
ATAAACTTTAGTACCACGAATCGTACTTTTTGTTTGTCTTTGGATGTAGCAGGCACTTGA
AGATTCTCCTGAAGAACAGCCTAGTACGAGTGCACAGATGGAACCCAGCATTAGTTCTGA
TGATAGCTCTTCTCAATGCAACGAGAACGTTTTGGATGATGTTTATGAAGATGATAGTTG
GTCCTCGGACTCGGACAATTGTATGAATTCTGCTAAACAGACTTACTTGAATGACGACAA
CAGTTCTTTGTCTGAAAACGAGAATTCATTATTATTCCTAGCAAATATGGGATACCCCGC
GGAGGAGGCTTCCATAGCGATGGAGAGATGTGGTCCAGAAGCATCGTTTTCGGAGTTGAT
AGATTTCATGTGTGCTGCTCAAATGGCAAGAGAAGAAGACGTCTATCTGCCCGAAGATGA
AAAGCCAAAACTAAATAGTGGTGGATACAAGAGGAAGATGTATAATGAACTTCCCGTAAG
GAAAAAGCAAAGGGCGATTACAGATGAAGAGCCAATTCATTTGCCCAGACCTATGATCGG
ATTCGGGGTTCCTACGGAATCCTTACCAGCTATAGTGCAAAGAACTCTGCCAGAGCAAGC
TATTGGCCCCCCTTTTTTCTATTATGAAAATGTTGCTCTTGCTCCAAAGGGTGTGTGGGA
CACCATGTCAAGATTCCTTTACGATGTTGAGCCCGAGTTTGTTGACTCGAAATATTTTTG
CGCTACCGCAAGGAAAAGGGGATATATTCATAATCTACCAATTGAAGATAGATTTCCTTT
ACTTCCACTTCCTCCACGTACCATTCATGAGGCGTTTCCTCTAACGAAGAAATGGTGGCC
ATCTTGGGATACACGAACAAAGTTAAATTGTTTGCAAACATCTATTGGGAGTGCAAGGTT
AGCTGATAGAATCAGGAAAGCTATGAAAGCGATGGAGAACTTCGATGGTGAGCCACCGTT
GATGGTGCAAAAGTATGTTCTAGATGAATGTCGGAAGTGGAATTTGCTGTGGGTTGGTAG
AAACAAAGCTTCTCCTCTGGAGACTGATGAATTTGAAATGCTAATGGGATTTCCACGGAA
TCATACCCGTGGAGGCGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACGCGTT
CCAGGTCGACACAGTGGCATACCATTTATCGGTGTTGAAAGACTTGTATCCAAATGGTAT
CAATGTTTTATCACTATTTTCTGGAATTGGTGGTGCTGAAGTTGCTCTATATCGTCTCGG
TATTCCATTGAACAATGTGGTTTCCGTAGAGATATCTGAAGTGAACAGGAATATTCTGAG
AAGCTGGTGGGAGCAAACAAATCAAAAGGGGAATCTTATAGATTTCAATGATATACAGCA
GCTGAACGGAGACGTCTTGGAGCAAATGATCGATTCATTTGGAGGATTCGATTTAGTAAT
TGGAGGAAGCCCGTGCAACAACCTTACTGGAAGTAACAGAGTGACTCGAGATGGACTCGA
AGGTAAAGATTCTTCTCTATTTTATGACTATGTTCGGATAGTGGACTTGGTCAAATCCAT
AATGTCTAATCGTAGAGTGTGACGAAAATATGTTTGAGTTTCTGAAGGGGATGGACTTGG
AAGGCAACGAGTAAAATGTTGTCTTTGATTTTGATTTTGGTTTGTACATATTTTTCGATG
CAGTATGTTCGTTCGTGGAAAAATGAACTGTTGAACTTCTCATTGTAAATGACATCAAAT
GACGTTGAAAATGGGTAGTCTTGAACTTTGTGATTCGTGCTGAGCTCATGAGCAAACGCC
AAAAGTGTTGTCCATGGAGCGAAAACTTATTAAATTTGAATTTTGTTCATGGGGTAAAAA
GTTCAAAACCATCTATTTTGAATGTCATTCCTCTAAATCACTCAAATTAGTCCGTGAAAT
TATAATTCGTCCAATCCATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGAT
TTGGGCTTGAAATTATC
