Microarray Probes on PGSC0003DMT400004843
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43706_PI426222305 |
JHI_St_60k_v1 |
TGGGTTCATGGGTTTCTTTTGGTCGTTGGATTATTCTTTGCGGCGTTTATTGAAATTTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004843
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004843 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G24140.1 |
+1 |
6e-134 |
392 |
200/358 (56%) |
Matrixin family protein | chr1:8536131-8537285 REVERSE LENGTH=384 |
Transcript Sequence (1113 bp)
>PGSC0003DMT400004843 1113 pgsc_dm_v3.4
ATGAGGATTCCTTTGTTCATCGCCATACTTTTTGTTCTTAGCGTTCCATTTCCATCTTCA
GCTCATTTCTTCCCAAATATTTCTTCAATTCCTCCTAATTTATTGAAACCAAATGCCACT
GCCTGGGATGCTTTTAACAAGTTATTAGGATGCCATTCCGGTCAGACGGTCGACGGCTTA
GCTAAAATTAAAAAATATTTTCACTATTTTGGATACATTAATAATTCTTCCAGTAACTTC
ACAGATGATTTTGATGATACTCTTGAATCTGCTCTCAAGACGTACCAGCTTAACTTCAAC
CTCAACACCACCGGTGTGCTCGACGCGTCGACGATTCAGCATCTCATAAAACCAAGATGT
GGAAACGCCGATGTAGTTAACGGTACTAGTACTATGAACTCCGGTAAGCCGCCGGCAGGT
TCTCCGACGATGCACACCGTAGCTCACTACTCCTTCTTTCCGGGAAGACCACGGTGGCCG
GCGAATAAGAGAGATCTGACATATGCTTTTGCACCGCAGAACGGACTGACGGATGATATT
AAGATTGTGTTCACACACGCGTTTGATAGGTGGTCGGAGGTTACTCCATTGACGTTTACT
GAAATAGCATCGTACCAATCGGCTGATATTAAGATCGGGTTTTTCAGCGGAGATCACAAC
GATGGAGAGCCGTTTGATGGTCCGATGGGTACATTAGCACATGCGTTTTCGCCGCCGGCG
GGGCATTTTCACTTGGACGGCGAGGAGAATTGGGTGATCGATGGTGCGCCGATTGTTGAT
GGGAATTTCTTTTCTATATTGTCGGCGGTGGACCTTGAATCGGTTGCGGTTCATGAAATC
GGGCATTTATTGGGTTTGGGTCATTCATCGGTAGAAGATGCTATTATGTACCCGACTTTA
GGAGCGGGTACCCGAAGAGTGGAGCTTAGAAATGATGATATATTGGGAGTCCAGGAGTTA
TACGGGTCTAACCCGAATTATACTGGGCCAAACCCAAATTTGACTCCGAGCCAAGAGAGT
GACACAAATGGAGCCCCGAAATTTGGTTTATCATGGGTTCATGGGTTTCTTTTGGTCGTT
GGATTATTCTTTGCGGCGTTTATTGAAATTTAG
