Microarray Probes on PGSC0003DMT400004241
Probe ID | Chip | Probe Sequence |
---|
CUST_28061_PI426222305 |
JHI_St_60k_v1 |
GACATTCTAAGTTTTCATGTTGATTTTTCTGAGTTACAAGCTTTGTCCGTCCCTCAATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004241
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004241 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G44670.1 |
+2 |
8e-24 |
94 |
55/99 (56%) |
Protein of unknown function (DUF581) | chr2:18425279-18425673 FORWARD LENGTH=93 |
Transcript Sequence (910 bp)
>PGSC0003DMT400004241 910 pgsc_dm_v3.4
TTATTAGGCTCTTTCAGTTGGGCAACAATATAAATAATAGAGTTTGGGCATACATTGCCC
TCCTCCCAGAATCTTCTTTTCTCATTCTTCTCTGCTCTTATCTATCAATCATTCATCTCA
GCAAGATCCAGTTTCCTTCCTTACACAACAAACCCAATTTTTCCCTTTTTAAATCTCGAA
AGAAGAAAAAATGAACGCTGCACTATACTACACTGGATGTGAAGAAAACTACCAACCCCA
TTTTCTTGATACCTGTTCTCTTTGCCAGAGAACCTTAGCTCACAACCATGACATCTTCAT
GTACAGAGGGGATACACCATTTTGTAGCCAAGAATGCAGACAAGAACAGATAGAAATGGA
TGAAGCTAATGAAAGAAAATGGAAAATTGCTGCAGCAAAGAGATCTTCAAGAACAAAAAC
AGAGACTCCAACAACTAAAGAAACTGATGCAAATAAAGCTGTACGAAATGGCACGGTTGC
AGTCGCTTGATTTGTTCACTAATCATGACATAATCAATGAATCTTGATGATGATCAACGA
AGCTATAAGCCGAAATAATAACAATAAAAAGACAGAAAATCGGCTTCTGATTTAGGATAT
CAAGTAAAATAAGGAGTACAGAAATCTTATGTATAGATATGATCGGAATCACAAAGAGAG
TGAATCCATCAAACAATTTTGTTGAATTATTTTTTTTCGGTTTTTAATTTACGTTTTGTC
AAATATTGTGGAGTGTCTGTAAAAATGGGCGTCCATATATGGAATTTGAGATCTCTAGCT
TTTTGTAATCTTCTTTTTCATCTTTCTTTTTCATAATCTTCAGCTGATCCAAATAAGCAA
AATAGGAAGACATTCTAAGTTTTCATGTTGATTTTTCTGAGTTACAAGCTTTGTCCGTCC
CTCAATTTTT