Microarray Probes on PGSC0003DMT400004191
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28112_PI426222305 |
JHI_St_60k_v1 |
CCAGCAGAACCTCAAGAAGAATGATATGTACCTAGCTATTCTTTGCTTTAGTAAAATTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004191
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004191 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G32450.1 |
+3 |
0.0 |
842 |
429/602 (71%) |
nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614 |
Transcript Sequence (2231 bp)
>PGSC0003DMT400004191 2231 pgsc_dm_v3.4
TTTCCATCTCTCCTCCTTGCTTCTCCTCACATGCATTTCCTTTACTTCCTTTATCCGATC
CTCCAATTAGAAAACAAATAGTATCTGAAGTTCAGCTAGCAGCTTTGTGGTCTATAACAC
AACAAACAATGGAGTGCTTAAACATTGGCAAAATGGATGAGAAGTTAGGGAATATTCCAC
ATGAAGAATTCACCCTTGATGGAACTGTAGATCAGCATGGTCGCCCTGCTGTGCGTGCCA
CGACTGGAAAATGGTTTGCTGGTGTTCTATTACTTGTGAATCAAGGTTTAGCTACACTAG
CATTTTTTGGAGTTGGAGTGAATCTAGTCCTATTTCTTACAAGAGTTATGGGGCAAGATA
ATGCTGAAGCAGCTAACAATGTTAGCAAATGGACTGGAACTGTTTACATCTTCTCACTTT
TGGGTGCTTTCTTAAGTGATTCCTATTGGGGTAGATACAAGACTTGTGCTATCTTCCAAG
CCATTTTTGTCGCAGGACTAGTATTATTATCATTATGTTCATACATTTTCTTGATCAAGC
CTAATGGCTGTGGAGATGAAGAAACCCCTTGTGGATCCCCTTCAAGTCTCCATACAATGC
TCTTCTATGTGTCCATTTACTTAATTGCTCTTGGAAATGGAGGGTATCAACCTACCATTG
CAACATTTGGATCAGATCAATTTGATGAAGATCATCCTCAAGAAAGTCACTCAAAATTGT
CTTTCTTTAGCTATTTCTACTTAGCATTGAATCTTGGATCTCTGTTTTCAAACACCATTT
TGGTCTATTTTGAGGATAAGGGAATGTGGACATTGGGTTTTTGGGCATCAGCTGGCTCAG
CTATTTTGGCATTAGTTCTGTTTCTTGTTGGGACACCTTGGTACCGACACTTCAAGCCAA
CTGGGAACCCTATTTCAAGATTTTGTCAAGTGGTTGTAGCTGCAATTAGGAAATGGAAGA
TAGAGCAACCTTCAAATGGAGATGAGTTATATGAAGGTGATGGAAGAGAGCTTGCTGATA
ATAGCAGTCGAAACATACTGCATACGAAAGAATTTAGATTCTTGGATAAAGCAGCTATAA
TCACATCAAAAGAGAGATTAGATAATCCGTGGCGCCTTTGTCCAGTAACTCAAGTGGAAG
AAGTGAAATGCATTCTAAGACTATTTCCAATTTGGCTTTGTACAATTCTCTACTCTGTTG
TGTTCACTCAAATGGCCTCTTTATTCGTGGAACAAGGCGATGCCATGAAAACCATGGTCT
CAGGCTTTCACATCCCTCCTGCTAGCATGTCAAGCTTTGATATCCTTAGTGTTGCAGCAT
TCATTTTCATCTACAGGCGAGTTCTTGACCCCCTCGTTGCCAGTCTAAAGAAGTCATCTC
CAAGAGGACTAACCGAGCTCCAACGTATGGGAGTTGGCCTCATAATTGCTGTAATGGCAA
TGTTAGCAGCTGGAATAGTAGAGCATTTCAGGTTAAAATATGCCAACAAAGATTGTTCAC
AGTGCACGAATTCGAGTTCTTTAAGTATTTTCTGGCAAGTCCCACAATATGTACTAATTG
GAGCATCAGAGGTTTTCATGTATGTTGGACAATTGGAGTTTTTCAATGGACAAACACCTG
ATGGATTGAAAAGCTTTGGAAGTGCACTTTGCATGACTTCAATTTCACTAGGGAACTATG
TCAGCAGTTTGCTTGTTTCCATTGTTATTAAAATTTCGACTAACGATAAAATGCCTGGAT
GGATACCTGGAAACCTCAACAAAGGCCATTTGGATAGATTTTACTTCCTCTTAGCAGCAT
TGACAATAGCTGATTTTGTGGTCTACCTCATTTGTGCTAAGTGGTACAAGTACATTGAGT
TTGAACAAAGAAGTAGTGGAAAACAAGATGAAGAGAAGCAGGGTGATTTGAGATTCTAGG
CTCAAAATTGATTAAAAAAGATCTAATCTCCATGACACAATGTTAGCAGGCTGGTCGTCT
ATTTGGACGAAGGATTCATTGGTACTACTACGAATAATAATGTAAAAATTCTTTTACGTG
CACTGTCAGTGTATATAAGTTAATAGTAACATATTAGAGAAGGGTATGATCATTGTTTAT
CTAAGTTGAGCAAAAGATGTTGTGTTGAAATTAACCATTGAGTAAAGTGTAAAGAAGATG
GCCAGCAGAACCTCAAGAAGAATGATATGTACCTAGCTATTCTTTGCTTTAGTAAAATTA
CTTCTTGTTCT
