Microarray Probes on PGSC0003DMT400004090
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36787_PI426222305 |
JHI_St_60k_v1 |
AGATTTATGTTTTTCCTTGTAGTGGTGTTTTTAAGCACCCTGTGAGAGAAGTCATGTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004090
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004090 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G34760.1 |
+2 |
2e-48 |
157 |
76/105 (72%) |
SAUR-like auxin-responsive protein family | chr4:16582471-16582794 REVERSE LENGTH=107 |
Transcript Sequence (659 bp)
>PGSC0003DMT400004090 659 pgsc_dm_v3.4
TCACAAGTCTACATTAGTCTTTCTTCATATATACACCAAAAACTCTCAACTTTCTTTATA
TTTAAAATTTCTACATACCAAAATGGCCATTAGAAAATCAAACAAACTTCCACAAGTTGT
ACTTTTAAAGCAAATAATGAAAAAATGTTCCAGTTTGGTTAAGAAGAACGACTATGATGG
TGAAGACCGCCTTCCGATTGACGTACCAAAAGGACATTTTGCAGTTTACGTTGGAGAAAA
TAGAACTCGATACATCGTACCTATTTCTTTTTTGACTCATCCCGAGTTTCAATGCCTCCT
TCGTTGTGCTGAGGAAGAATTTGGGTTCGATCATGACATGGGCATCACAATTCCTTGCGA
AGAATTCATTTTCCAATCACTCACTTCCGTCCTGAGATAATAAATTATTTAAAAAGAGAA
AAAAAATGTGAATATTAGGTGTAAGGGTTAATTTTTGAGTGAAGAAAGATGGGTTCAAGA
TGAAGCAATTTGCTTCTCTTTTTTCAATCATTTTTCTTCACTCTGTTTTTTAAAATATTT
TTTGTGAGTTTTGAGTAACCCTGACCTAGGAATCACATGGATATTAGTAATGTTTCAGAT
TTATGTTTTTCCTTGTAGTGGTGTTTTTAAGCACCCTGTGAGAGAAGTCATGTTAATCT
