Microarray Probes on PGSC0003DMT400004089
Probe ID | Chip | Probe Sequence |
---|
CUST_36718_PI426222305 |
JHI_St_60k_v1 |
TTCCCTTGAAGTGGTGTTTTTTCAAGCACCCTATGAGAGAAGTTAATTATTAAATGTGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004089
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Source Transcript PGSC0003DMT400004089 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G34760.1 |
+2 |
7e-50 |
162 |
78/104 (75%) |
SAUR-like auxin-responsive protein family | chr4:16582471-16582794 REVERSE LENGTH=107 |
Transcript Sequence (736 bp)
>PGSC0003DMT400004089 736 pgsc_dm_v3.4
CTTTAGTATCATTCCATTCTCTCAAAGCAAAAAAGTATTTCTTACTGAAGCTCTCATCTT
TCTTTAATTTCTTCAAGAAAACCATACTAAAATGGCCATCAAAAAATCAACTAAGTTGTC
ACAATCTCCTGTTTTGAAGCAAATTTTGAAGAAGTGTTCTAGTTTGGGTAAAAAAAACGA
AGACCACCTTCCTGTTGACGTACCAAAAGGACATTTTGCAGTTTACGTGGGAGAAAATAG
GACTCGATACATCGTACCTATTTCTTTTTTGAGTCATCCTGAGTTTCAATGCCTCCTTCG
TTGCGCTGAGGAAGAATTTGGGTTCGATCATGATATGGGCATTACAATTCCATGTGAAGA
ATTTGTTTTCCAATCACTTACATCAATGCTGAGATAATTAAATAATTGGAAAGAAGAAAA
AAGGTGAATATTAGGTATTAAGCTTAATTTTGGAGTGAATTAAGAAAGATGTGTTCAAGA
TGAAGCAAGTTAAATTAGTAGTCTTTTTGCTTCTTTTTTTGTAACGTCTTTCTTTTCACT
TTTTTTGTTTTTAATTTTTTTTTTATTTGTTTATTATTTTGTCAATTTCCTCTAACCCTG
ACCTAGGAATCACATGGATATTAGTAGTGTTTTTTTATGGGTTGGTTGGAATTTTTTTCC
CTTGAAGTGGTGTTTTTTCAAGCACCCTATGAGAGAAGTTAATTATTAAATGTGTCTCAA
TATATTTAAATTTGCC