Microarray Probes on PGSC0003DMT400004086
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36768_PI426222305 |
JHI_St_60k_v1 |
TTCTGCAGTAATGTGGAAGTACTGAGTTCAACTGAATGCAATAGAAACTGGATGTAAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004086
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004086 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21210.1 |
+1 |
1e-29 |
111 |
52/80 (65%) |
SAUR-like auxin-responsive protein family | chr2:9085513-9085809 REVERSE LENGTH=98 |
Transcript Sequence (1203 bp)
>PGSC0003DMT400004086 1203 pgsc_dm_v3.4
TGGACACAAAGTTTGCATCTGGGGTATGGTTAATTCCTAGATATCCTCATAAGCTACCAG
CAATATTTATGGATTTGATTCTTAGAGATCCTTTGTTCCCTATAGGAAAATATGTGAGGA
CCTATTGCTAAAGCAATTAATCATGTCAACTAGCTGGAAGGCAGGACCACGTGATTACTA
ATATATCATTGTCTTTAAGACTTTAACTGATGTCCAATCCAAATGGCTCTTTCCAAGTTT
CAAAATAAGGTAGGGCCTATTGTTCTTTAACCAACACCACAAAGTTTTCAATACTTGGAA
GGCAAGAGCATGTGATACTACAGTGCCATTGTCTTCTGCTGGTACCCACACATTCCTATT
CAACACACATCAACATGAGTTGCCATTTCCTATATAAACATAACTAAAGAGGTATCGACC
ACCACAACACTCAGCAAACATCAAAGCTTTCTCTGCTTTTGAGTAACCTTACAATCCTTC
TTTTTTTCTCATCTATACTAAAACTAAGAGATCATGGCTATTCTTCGTATGATCAAGAAG
TCTTCTGCAACTAGAGATATTCCCAAGGGTCATTTTGCTGTGTATGTTGGGGAGATGCAG
AAAAAGAGATTTGTGATCCCCATATCATTCTTGAGCGAACCTTTATTTCAAAACTTGCTT
AGTCAATCTGAGGAAGAATTTGGCTTCGACCATCCAATGGGCGGTGTGACTATTCCCTGC
AGCGAGGATTTGTTCATCGATCTCACATCTCGATTGCGGAAGTGAGAAGGAACCCAGTCC
CCATTTTTTAATTATACAATTTTGTATAGTTGTAGTAAGCCAGGATAGACACTGTGTACA
GTTGAGAGTTAGAAGAAACACTAGGTAGACTAAGGACACATTTTTCTACTTCAAAAGAAA
TTGAAGTAATGAAACTTCTTACTTACATGGTTTCATTCTATACCATACATTGATGTAATC
AATTCATTGCAACAGAAATTTTTTGCTCAACTCTCATTGTTTGTTAGTCAGAATCTAGTC
TTCTAAAGTCCCACAGCTCATTCTATTGGTAATAATTACACTTAGTGGTTCCAAATAAGT
CAAATACACTTGGTAGTGTCCATCATACAATGAAGTATAACTCAACATGTACTAGATCTG
CCATTCTGCAGTAATGTGGAAGTACTGAGTTCAACTGAATGCAATAGAAACTGGATGTAA
ATT
