Microarray Probes on PGSC0003DMT400003959
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5385_PI426222305 |
JHI_St_60k_v1 |
CGTATGAGGTTATTGCTGATTATGAAAAACAGGGTCTTGATCGACTCCAGATTATGCCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003959
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003959 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G33255.1 |
+3 |
1e-113 |
339 |
156/214 (73%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:14098795-14100358 FORWARD LENGTH=245 |
Transcript Sequence (1471 bp)
>PGSC0003DMT400003959 1471 pgsc_dm_v3.4
CACTTGTTTTCTTTCCTAATCACACAGTCCATTAAAACCTCTCTCCATCATCACTCCATT
ATTTGTACAATAAATAAATGCAGCTTCTTCTTTCCAAAGCTTCCCTTTTTTTCAATCCAA
GAACTATTTTTTCTTCTTCAACATCAATGGCTACATCTAACTCAATTTCTCTTTCTTCAA
AACCCCGTTTAAAGGGTATTGTATTTGACATGGACGGAACCCTAACGGTCCCCGTTATTG
ATTTTCAGGCCATGTACAGGGCTGTTCTGGGTCATGATGAGTACCTTGCTGTTAAATCCA
AGAGCCCTTCTGGCATTGATATTTTGCATCACATTGAAAGTTGGAGCCCTGATAAGCAAC
GTAGGGCGTATGAGGTTATTGCTGATTATGAAAAACAGGGTCTTGATCGACTCCAGATTA
TGCCTGGTGCTGCTGAACTTTGTAGTTTTCTTGATTCTAGGAATATTAGAAGGGGATTAA
TCACTAGGAATGTCAAAGATGCAGTTGACTTGTTTCACGAACGCTTTGGAGTGAAATTTT
CTCCTGCACTGAGCAGAGAATATCGTCCATACAAACCAGATCCAGCTCCATTGCTGCACA
TTTGTTCAACTTGGGAAGTTCAATCTAATGAAGTAATGATGATTGGTGACAGCCTTAAAG
ATGATGTTGCTTGTGGCAAACAAGCTGGAGCTTTTACTTGCTTGCTCGACGAAACAGGAA
GGTATGATGCTCCAGAATATGCAAACGTCCAACACAAACCAGACTATAAGGTGTCTTCTC
TTGTTGAGGTTCAGTCACTTCTAGAAAGAGATTTTGAGCTGACATCTTGATTTTTGCAAA
TCTTTGGAACCCCCCTGGCCTGGCTGAGCAACGAGATATGGTTTACCCTCGTAAGCCCTC
CATGTAGCATTCCTGCATGCACGTTTCTTTTGGTTTCTGTAAGATTACAGTAATTAGATT
GCAGCTTTGCTCATGTGAGCGGGAATCTTTGAGATGGTCTCAAGTCATTCATTTTTCAAG
CCAAAAATGGGGAATATGAGTTTTTGTTCACTCTTGGTGGTGAAACTGGTGATTTACAGA
GACTTTTATCGATTAGCCTGGTTCGTTGTGGGTGACATAGTCACGAGACCATAAATGTGT
TTTCGAATGTAGTGTTCTTGTCATCTCTTTGCTCGTAATGGAAGCTCTAGCCACAGGTCT
TGCACGCGAATAGTAGCTAAGATTTCTTAGGAATAATGGTACTTGTTAATGCAAAGATTT
TCAGAAATGAGACCAAGTTGGTCTGAGAGTTTTTTTCCATCTTTTTTGGAATCCCCGGAC
AACTCACAACCTCTGTCACATCCTCTGCCGTGTGGATTAATCATAAGTAACAAATGTAAC
TTTTTTATTTTTCATTTTTTGAATTCCTATTCTATTCCATCAGTTAACAATGTAGATCAA
ATTGCATCGTTCATATGTACGTACATTGGTG
