Microarray Probes on PGSC0003DMT400003844
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5094_PI426222305 |
JHI_St_60k_v1 |
CTAGGTCATGATGTGCTTCTTAGCTTAGGGGAAACATTGTCACATATTTGAATATATTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003844
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003844 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52010.1 |
+3 |
4e-152 |
448 |
254/449 (57%) |
C2H2-like zinc finger protein | chr5:21121626-21122816 REVERSE LENGTH=396 |
Transcript Sequence (1844 bp)
>PGSC0003DMT400003844 1844 pgsc_dm_v3.4
GGGAAGGTCATGACCTCATCCATACAATTGCTATTCTATTTCTATCTCATTCCGTCTAGG
AAAAAAAAATCCCCAGCACGAACAATTCCTTCTTGGATATTCCTTTGTTGATTATGATGC
CATTGAAGTATCCTCAAGCATTGATTACCAATAAACCCTTCTTCTTCGCTTTCTACCACT
AATTTCCACACCAAGAAAATCAACATATATTTACAATGTTGATGAGCACAGTCTTCAACT
CCATTGAACCCTTTCATCTCAAAATCTCTTCTTTTTTCCCAATTTCACTTTCCACTAATG
TTACTGTATCCTTCAAACCCAATTCCCCAATCGCCGCCCCTCGTAGACCCATTAAATGGC
ACATCAGTGCTTGTGCAGCTGGTCAAGAAATCGACATGGAAAGAACCAAACAAGGATTAT
ACACAGCAAAACCCAAGAAAGTTGTAATCTTGTGGGACTTAGACAACAAACCACCACGAG
GCCCACCCTACGAGGCAGCCATGTCGCTGAAAAGGGTAGCGCAATGTTTTGGCGAAGTTG
TGGATATGTCCGCATATGCTAATCGTCATGCTTTCATCCATCTTCCTCAGTGGGTTGTTG
AAGAAAGGCGTGAAAGACGACATCTTGATGTTCTTGAACGTAAAGGGGTTGTAACCCCAT
CCGAACTTTACATATGTTCTGTCTGTGGACGAAAATGTAAGACCCATATGGATTTAAAGA
AGCATTTTAAGCAGTTACATGAAAGGGAAAGGGAAAAAAAACTTAGTCGTATGAGGTCAT
TAAAAGGCAAGAAAAGACAGAGATTTAAAGAGAGGTTTGTTGATGGTAATTATAAGTATA
TAGAGGCTGCTAAGAGTTTGATAACACCTAAAGTGGGTTATGGTTTAGCATCTGAGTTGA
GGAGAGCTGGGGTTTATGTAAAGACTGTGGCAGATAAGCCACAGGCAGCAGATTGGGCAT
TGAAAAAGCAAATGCAGCACTCAATGAGTAGAGGGATAGATTGGCTGTTTTTGATTTCTG
ATGATTCAGATTTTTGTGATATGTTGAGGAGAGCAAAGGAAGCAAATTTGGGAACAGTAG
TAGTTGGGGATTGGGACAGGGCATTGGGGAGGCATGCTGATTTATGGGTTCCATGGAATG
GGGTAGAAAATGGAGAGATAACAGAGAAGGATTTAGTGTTAAAGAGTGAGAGGAGGAGGG
AGTCTTGGGATAGAAGTAATGCACAGTTCTCTGTAAGTGAGTTCAATGGTGGGATAAGAG
AGGAGGGTACTAGTTTAGGAAGTTTGATGGATGACATTGTTGAGAAGTTGGAGTCTTCTG
GCACAAGGATTTCAGCTTTCTCCGAAGGCGAGGAGGATGAAGAAGTTGAAGAACTGGATG
AGGAGGACTGGCTTCGAGCAAGATTAGATCAACGAAGTGATGACGAATATAATACAGAGG
ACTCCATAGTCAGCGACGAAGAGGAGGGGGACTACTTATTGGACAGTGAGGACGAAGATA
CAGGCGAGATTTTATAAAGTGATGACGAAAGCAATAAGAGAAAGAACAGTTTGCCATTGG
TTTTGTCAAAAGATTTGTACGAATTGATTGAGATAGAGCATGTGCTCTGTGAAAATGAGG
TTTAATGAAAGGTGGCTAAAGCAATTTGACATATTGGTCGAGTTTGTCTTTGTCAGTTAA
GCTATCTTAGATTATGTGAGGTAACACAGATGTATCTGACCTTTGATAATGAAAATATTG
CTTTGAAAGTTTACAGTGGTTTTATTCTTTTCACAAAATTTCTACTAGGTCATGATGTGC
TTCTTAGCTTAGGGGAAACATTGTCACATATTTGAATATATTAC
