Microarray Probes on PGSC0003DMT400003777
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5193_PI426222305 |
JHI_St_60k_v1 |
ATCCTTCTGTCTACGCTAAATGGGTGTCACTACCTATACACATGAAGCCACAAGCACAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003777
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003777 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G60000.1 |
+1 |
2e-86 |
266 |
128/175 (73%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:22093678-22094540 REVERSE LENGTH=258 |
Transcript Sequence (1173 bp)
>PGSC0003DMT400003777 1173 pgsc_dm_v3.4
ATGGGTGTCACTACCTATACACATGAAGCCACAAGCACAGTGTCCCCTACTAGGTTGTTC
AAAGCTTTGGTTGTTGATGCTGACAATCTTATCCCTAAATTGATGCCAAATGTTAAGAAT
GTTGAGACTGAGGGAGATGGAAGTATCAAGAAGATGAACTTTGTTGAAGGTGGTCCAATA
AAGTACTTGAAGCACAAGATTCATGCAATTGATGACAAGAATTTGGTAACAAAATATTCA
CTTATAGAAGGTGATGTTCTTGGAGACAAATTGGAATCAATTACCTATGATATCAAATTT
GAAGCTGCTGGAAATGGAGGTTGTGTTTGCAAGACAAAAACTGAGTACCACACAAAAGGT
GACTATGTTTTAAAGGAAGAAGAACACAATGAAGGCAAGAAACAAGCCATGGAACTTTTC
AAGGCTGTCGAAGATTACCTCCTCACTAATCCTTCTGTCTACGCTAATGAAGTGACGTCG
ATTTACAAGAAGTGGAGGGTATTGCCGAGGCTGGCAGCTGCGGTGGTGCAAGAGGAGGTG
GAAGCGGCGGTGACGGAGGAGGAGGAAGAGGTGCCGGTGCCGGCGGTGGATGAGGAGGAG
GAGAAGGTAGGAGAGGGTTTCGATGGGAGTAGTGAAAGTGAAGGTGTTAATACTAAGCTT
TATTTTGGGAATTTGCCGTATCTTTGTGATAGTGCACAACTTGCTGGGATTGTTCAAGAC
TATGCTAGTCCTGAGCTTGTTGAGGTTCTTTATGATAGGGACACAGGTAAAAGCAGAGGA
TTTGCTTTTGTGACAATGAGTTCTCTTGAAGATTGCAAGACAGTCGTCGAAAATCTAGAT
GGAAGAGAGTATGGTGGCAGAACCTTAAGGGTGAATTTCTCGGACAAGCCTAAACCAAAA
GAACCCCTTTACCCTGAAACAGAACACAAGCTCTTCGTTGGTAATTTGGCGTGGTCAGTC
TCATCTGAAAGTTTGGCACAAGCATTTCAAGAATATGGAGCTGTTGTTGGAGCTAGGGTA
CTATATGATGGTGAGACCGGGAGATCACGTGGCTACGGTTTTGTGAGCTTTGAGACTAGA
GAAGAAATGGAGAATGCTCTTAACAATCTCAATGGAGTGGAATTGGATGGAAGGGCATTG
CGAGTTAGCTTAGCAGAAGGGAAGAAACAATAA
