Microarray Probes on PGSC0003DMT400003037
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49721_PI426222305 |
JHI_St_60k_v1 |
GTAATTTTCAATTTTCGTCAAGTTCAAAGCAGCGTGGTGCTTCCCATGTTATTTGAGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003037
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003037 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49480.1 |
+2 |
4e-36 |
129 |
78/162 (48%) |
Ca2+-binding protein 1 | chr5:20070812-20071294 FORWARD LENGTH=160 |
Transcript Sequence (849 bp)
>PGSC0003DMT400003037 849 pgsc_dm_v3.4
CTTGTCAACCAAGCTTAGGAGTATCCCTTGGAATTCTCCTATAAAGTCGCCATCCTTTTT
TATTTTACTCATATATTCTCTACAACCTTTTCAATTTCTTCAATTTACAAAATATTTTAG
TTCTTCAATTACCTGCAAAACACACCGGAAAATGTGTCCCACCGGAAGTGTTTTGCATTC
TGCCGCCGGCGCCGGAAAACCAAATCTCCGGTCAGCTTTCGACGTTTTAGACGTTGACCG
CGATGGAAAGATTAGCAGAGAAGATCTCCGGACATCGTACGGTGGATTCGTCGGCGACGA
TATGATTGGTACGATGATGACGGTGGCCGATTCGAACGAAGACGGATACGTTGAATTTGA
GGATTTCGAGAAGGTTTTGGATAGTTCTATTAACAGAAACGGCGAGGAGAAGAGGAAAAA
TGAAACAGGGATGAATGTAATGGAGGATGTTTTCAAGGTGATTGACAAAGATGGAGATGG
TAAAGTTGGGGTTGAGGATTTGAAGAGTTATTTGAGTTGGGCTGGGCTTCAAGTTGATGA
TGATGATATTAAGGCCATGATTAAATTGGGCCATGGTGAAGAAAATGGTGGTGTTACCTA
TGAAGGTTTTCTCCAAATTTTGTCTCTTTAATTTGTTCCATTGATGAAGATGATAAATGT
TAGATTAGGTGAACAAGGATTTTTTGTAATTTTCAATTTTCGTCAAGTTCAAAGCAGCGT
GGTGCTTCCCATGTTATTTGAGAAAAAAAGGCGCACCATCATTTTGTATGCTACTTTTTC
TGATTTTATTTGATATTATATTGTTTGTTTTGTTTGAAAATCAAGTTTTTATATCTCAAA
TAAAAATAT
