Microarray Probes on PGSC0003DMT400003036

Probe IDChipProbe Sequence
CUST_49722_PI426222305 JHI_St_60k_v1 GTAATTGTGCTTCTTTCTTTTGTTCATAAAATATTTCGCAAACGGAGGATTTGCAAGCAC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003036

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Source Transcript PGSC0003DMT400003036 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G27250.1 +3 5e-17 81 45/85 (53%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40800.1); Has 104 Blast hits to 104 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10061633-10062481 FORWARD LENGTH=282

Transcript Sequence (1177 bp)

>PGSC0003DMT400003036 1177 pgsc_dm_v3.4
TGATCAAAATGGTCCCTAATATATGGAGGTTGCTTTATTTTAATCCTTAATATATATCAC
ATGATCAATATAGTACTTAATATATTATAAAAGGTACTCAATTTGGTCTTTGCCCTAAAA
GTAACACATCCATCCGTTAAATTTAACTAATGGCCCCACTAAAATATAAAATACCCAAAG
CTCCTTTCTCCTTCATCTGCTGAAAAGCTTAGCCTAATTTTTCCCTTTTTCCTTCTTCTC
ACTTCTCTGTTCTCCGGCGATCATAATGTTCTAAGCTATTGGCGCACCACCGCTAGTCCA
CCAACCAGCCGCTGTTCGCCACTTCCGTCCCTCCTCCACCCCTCCTCTGTTCCCTCTGTT
GTAGCTCTAATTCAAAGATAGGATTTCTAAAAAAATTAAATTTATTGTTTAGTTAGAAAA
TTAGTTTGTTTTTCACATTGTTGGGCAACATTTTTCAGCTTTTTAAATTTGCCACAAGGG
GCTGATGAAGCATCAACCAAGCAAATTTCATGTTGAAGGTATTGTAAAAACGAATTCACA
ATTTATATAAAACAAGATCGAACTCGGTTTTTACACTTTTATCAAAAGCAGAACTCAATT
ATTTGAACCACATTTTTGAGATGTAAAAGTCTTAAAAGTGGAGGTGTTAAACTTAACAGA
GGAATCTGTTATTTTTAGGGCAAATAACCAAAATGAGTACTTTCTATGATACATTAAGGA
CCATATGGATCATGTAAAATATTTTAAGGATCAAAATAAAGCAATTCTTATATATTAAGG
ATCATTTTGATCATTTTCTCGTGAATCTGGCGTACCGGAGAATGGTTGATCCTCTAGAAG
GTTCTGGAAATTCGCCGAAGCTGGTGACGTGGCTGGTAGTGAAGGAGAAAATATTGTTGC
CTAACTCATCAGCTTTTGCATGCACTGTGAGGATACTGTACACGAAGAACTCACAGACAA
TGCCGTGTGATGTATGGAAGATGGAATTTGGAGGATTTGCATGGAGACTTGATGCTAAAG
CTGCTCTTAGATTGGGTCGTTAATGAGGATGCAACTAGCAGGTAATTAAATTACCTAAAT
ACTTTATTACGTATATAATGCTAAATAATTATTATTGGTAATTGTGCTTCTTTCTTTTGT
TCATAAAATATTTCGCAAACGGAGGATTTGCAAGCAC