Microarray Probes on PGSC0003DMT400003000
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12384_PI426222305 |
JHI_St_60k_v1 |
ATTCTAGATGATTCTGGAACTGTGCTTGTTCTGGGAAACGTTGTGTTCCTCAGGCCTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003000
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003000 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23790.1 |
+1 |
7e-104 |
317 |
181/333 (54%) |
Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336 |
Transcript Sequence (1411 bp)
>PGSC0003DMT400003000 1411 pgsc_dm_v3.4
TGGCTTCTTTCTTCATCATCGTTGAACAATCCAAATCCTAAACCAAAATCTCCCATTTAT
TCAAATCTATTTTTTCTCTCTTTCTGAAACCTCTTATTATCAATGGCGTTCAAAAAAACT
CTAGCTCAGCGTCTTTCCAATGTATACAAAACCACCGGTTTTTCCATTTCTGCTTGTCGC
ATATCTTCATCATCCATGTCAGCCAGAAAGCTGGTCCCTCCTCATCCTGACGACAAAATC
GCTCCAGATCCCGGAGATAATGGAATTTTCCGCCGATTCATCCAGCGGCGACTCATTAAC
ACATATCCGGCGACTTCGCCGGAGCTCCGGTCACTACCTATCGGTGAAAGTCTCATCGAG
AAAATCCGTGAAATGGATGTCAACAGAAGCAGGATCAAACTCGATGGATTCCTGCCGCCG
CTAGAGATGCGGCCGGAACCGGAGCCGGAGATAACGACGGAGGGGAAATTGACGGTGGCT
GATGCGAAGAAGCTGTTAAAAATATCACAATTGGAGATGGTGAAATTGAGGCTAAAGCAA
ACTGAAAAGAATTGTATTTCGTACCCGGAATTTGTTCAGATCTGCTCTGGAATTAGTTCG
AACAATGATTTAGGCATGGAATTCGCGAAGATTCTAGATGATTCTGGAACTGTGCTTGTT
CTGGGAAACGTTGTGTTCCTCAGGCCTGATCAGGTAGTGAAAACTCTACAAAGTCTATTG
CCAATCCCCGCGAACCAAAATGACCCACAAATGATAAAGGAGCTCAACCAAATGGAAGAG
GAAAAAACAGCAATTGACAGAAAAGCAGAGTCATTGGTGCGTAGAGAATTATGGTGTGGG
CTAGGCTACTTTGTCATTCAAACAGCAGCATTCATGAGATTGACATTTTGGGAACTCTCC
TGGGATGTCATGGAACCAATTTGCTTCTATGTTACATCATTTTACTGCATGGCTGGTTAT
ACTTTCTTCCTAAGGACGGCGAAAGAGCCTTCTTTCGAAGGATTTTTCCAGAGCCGGTTT
GTTGCTAAGCAAAAACAACTCATGAAGGTTCGGAATTTTGATCTTGAGAGGTATAACGAG
CTCAAAAGAGCTTGTTATCCTCAATCGTCGATGGCGCATCCTGAAAAAACCTTAACGTTT
AAATGAACATTTTGTTAGGTAGAAGAATTTAGTTTAGGAATAGTTAAGAAGGGAGTGCAA
ACGAGTTAAAGAGACATCAATTAGTCTCTCTGTTTTTTTCTTCCCTTTTTTTGGTTTAAT
TTTTAACTTTCAATGTAACGGTCAATGTATATGCAAATGAAGAGGAATTCCAAATATAAA
AATGTGTTTTACCCCAAGTAGTATATGCTTCACTTTGCACTTGCCTTCGTGGTGCTTAGT
CAGATTTTCATTATCAAAATAATTAAATTAA
